Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02185 ATGGTTAGTTTATTATCTGCTCTCTTTCTTTTTTCGCTCTCACTGCATTGTTTCGTGCCTTGCTTAGCTGCAACTAAAAAAAACATTACCACAGATGAATCCGCTCTTCTTGCATTCAAATCTCTCATTACTTCAGATCCTAATCATATATTGGCTAATAATTGGTCAACTTCATATTCTGTATGCAATTGGGTTGGTGTAACTTGTGATGAGAAACATAATAGAGTCCACACCTTAAATCTCACAAACATGCGTCTTAGAGGTACTGTTTCTCCAAACTTGGGGAATATGTCGTTCCTTGTCATACTTGACCTCTCCTATAATAGCTTCGGTGGTCAAGTTCCTTTTAAAGAGATATGTTGGTTGCGCCGATTAAAGTTTCTTCGTTTAAGCTATAACGAGTTTAATGGAGAAATTCCTGCAACGTTGGGCAACTTATCACAACTTGAATATTTGAAACTTGGTAGAAACAATTTCAGTGGTTTAATCCCTCAATCTATCGGTAATTTTCACCGGTTGAAAATTTTGGCTCTGCAGTTTAACATGCTGTCGGGACCCATACCCCAAACAATTTCAAACATGTCTTCACTTGAAGAAATATATTTATATAAAAACAACTTTTCAGGTCCAATACCCGAGGAGATTCACTATCTTGATCAACTTGAGATTCTCAGTTTCGCATACAACGGCCTTAGTGGATCTATTCCGTCCAAACTCCTCAACATGTCATCCCTGAAAATGTTGTTTCTTGCAAAGAATAATTTCTCAGGAATAATTCCATCAAATACGGGATACAATCTTCCTAGATTGCAGTATTTACACTTGAATCATAACAGTTTTGTTGGAAATATTCCAAATAGTATCTTCAACTCTTCTATGCTCATTGAATTCCAATTGAATTTCAATGCGTTTAGTGGAACTCTACCAAATATTGCTTTTGGAAATTTAAGGTTCCTCGAATCAATTTTCATACAAGACAACGATTTGACAATAGATGATTCTCTTCAATTTTTTACGTCCTTGTCCAATTGTAGATATTTGAAATATCTAGCTCTATCAAGGAATCAAATACTGCCCAATCTTCCTAAGTCAATCGGAAACATAACTTCACAAATCATTTGGGCAGAGTCATGTGGAATTGATGGTAATATTCCCCTAGAAGTTGGAAACATGAGCAAATTGCTATATATTGATATATATGGGAATAAGATAAATGGACCAATACCTGGTACATTCAAAAGGTTACACAAACTTCAGGGACTGGATCTTGGAAACAATAGTCTACAAGGATCATTTACTGAGGAGCTATGTGAAATTGAGAGTTTGAGTGAGTTGTATCTTGAAAATAATAAGCTTTTCGGAGTTTTACCAACATGTTTGGGAAATATGACTTATCTTAGAAAGATATACATAGGATCTAACAATTTAAACTCTATGATACCTTCCTCTCTTTGGAGTCTCAAAGATATCTTAGAGATAAATTTGTCCTCTAATGCTTTCGTTGGTAATATTCCACCTGAGATTGGGAATTTGAGAGCAATTACACTATTAGATCTATCTAGAAATCAAATTTCAAGCAACATTCCTTCAACCATCAGTTTCTTAAAAAAATTGGAAGATCTCTCTTTAGCGGATAACAAATTAAATGGATCAATTCCTACATCACTTGGTGACATGGTAGGCTTAATGTCCTTGGACTTGTCCCAAAACATGATAACCGGTGTTATTCCAAAATCCTTAGAATCACTTTCGTGTCTTCAAAATATCAATTTATCATATAATAGATTACAAGGAGAGATTCCTGATGGTGGACCTTTCAAAAATTTCACAGCTCAATCATTTATGCATAATGAAGCACTTTGTGGAAATCATCGCCTCCAAGTACCTCAGTGTGATAAACAAGCTAAGAAAATGTCAATGGAAAATAAGGTATTACTAAAATGCATACTTCCCATTGTAGTGTCAGCCATTTTGGTTGTTGCAATTATCATACTTTTAAAACCGAAAAAGGTTGAAAATACTCTTGAAAGGGGTTTATCAACTTTTGGAGCTCCAAGAAGAATATCTTATTATGAACTTGTGCAAGCAACTAATGGATTCAATGAGAGTAACTTACTTGGAAAGGGGGGATTTGGTTCTGTGTATAAGGGGAAGCTTCCTGATGGTGAGATGATTGCGGTTAAAGTAATTGATTTGCAATCAAATGTAAAATCAAAAAGCTTTGATACAGAATGCAATGCAATGAAAAATCTTCGACATCGAAATTTGGTTAAGATTATCAGTGGTTGTTCGAATCTTGATTTCAAAGCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTATATTCACATAACTATTGTTTAAATTTCATACAAAGGTTAAACATAATGATAGATGTTGCATCTGCATTGGAATATCTCCATCATGGTTCTTCGGTTCCAGTGGTTCATTGTGATCTAAAGCCTACAAATGTGTTGTTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAGTCTAAAACACATACTCAGACTTTGGCTACTATTGGATACCTTGCACCAGAGTATGGATCAAAGGGAATTGTTTCTGTCAAAGGAGATGTGTACAGCTATGGCATTATGCTAATGGAAATCTTCACAAGAAGAAAGCCAACAGATGATATGTTTAGTGCAGAACTAAGTTTGAAAACATGGATCAGTCAATCATTGCCTAATTCAATTATGGAGGTCATGGATTATAGTTTAATCCAACAAAATGGGGAACAAATCGATGACATATTGACTTACATGAAATCTATTTTTGGTTTAGCCCTGAGTTGTTGCAAAGATTCACCTGAAGCAAGAATTAATATGGCTAATGTTACTGTGTCGCTAATCAAAATCAAGACATTGGTTCTTGGCGCAAATAGGTCCTAG 2958 0.3526 MVSLLSALFLFSLSLHCFVPCLAATKKNITTDESALLAFKSLITSDPNHILANNWSTSYSVCNWVGVTCDEKHNRVHTLNLTNMRLRGTVSPNLGNMSFLVILDLSYNSFGGQVPFKEICWLRRLKFLRLSYNEFNGEIPATLGNLSQLEYLKLGRNNFSGLIPQSIGNFHRLKILALQFNMLSGPIPQTISNMSSLEEIYLYKNNFSGPIPEEIHYLDQLEILSFAYNGLSGSIPSKLLNMSSLKMLFLAKNNFSGIIPSNTGYNLPRLQYLHLNHNSFVGNIPNSIFNSSMLIEFQLNFNAFSGTLPNIAFGNLRFLESIFIQDNDLTIDDSLQFFTSLSNCRYLKYLALSRNQILPNLPKSIGNITSQIIWAESCGIDGNIPLEVGNMSKLLYIDIYGNKINGPIPGTFKRLHKLQGLDLGNNSLQGSFTEELCEIESLSELYLENNKLFGVLPTCLGNMTYLRKIYIGSNNLNSMIPSSLWSLKDILEINLSSNAFVGNIPPEIGNLRAITLLDLSRNQISSNIPSTISFLKKLEDLSLADNKLNGSIPTSLGDMVGLMSLDLSQNMITGVIPKSLESLSCLQNINLSYNRLQGEIPDGGPFKNFTAQSFMHNEALCGNHRLQVPQCDKQAKKMSMENKVLLKCILPIVVSAILVVAIIILLKPKKVENTLERGLSTFGAPRRISYYELVQATNGFNESNLLGKGGFGSVYKGKLPDGEMIAVKVIDLQSNVKSKSFDTECNAMKNLRHRNLVKIISGCSNLDFKALVMEFMSNGSVDKWLYSHNYCLNFIQRLNIMIDVASALEYLHHGSSVPVVHCDLKPTNVLLDENMVAHVSDFGIAKLMDEGQSKTHTQTLATIGYLAPEYGSKGIVSVKGDVYSYGIMLMEIFTRRKPTDDMFSAELSLKTWISQSLPNSIMEVMDYSLIQQNGEQIDDILTYMKSIFGLALSCCKDSPEARINMANVTVSLIKIKTLVLGANRS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02185 985 ProSitePatterns Protein kinases ATP-binding region signature. 706 728 IPR017441 GO:0005524
Trre15g02185 985 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 188 264 - -
Trre15g02185 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
Trre15g02185 985 ProSiteProfiles Protein kinase domain profile. 700 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02185 985 SMART LRR_sd22_2 391 423 - -
Trre15g02185 985 SMART LRR_sd22_2 511 530 - -
Trre15g02185 985 SMART LRR_sd22_2 170 196 - -
Trre15g02185 985 SMART LRR_sd22_2 218 244 - -
Trre15g02185 985 SMART LRR_sd22_2 559 585 - -
Trre15g02185 985 SMART LRR_sd22_2 535 550 - -
Trre15g02185 985 FunFam Serine-threonine protein kinase plant-type 681 775 - -
Trre15g02185 985 Gene3D Ribonuclease Inhibitor 29 191 IPR032675 -
Trre15g02185 985 Gene3D Transferase(Phosphotransferase) domain 1 776 980 - -
Trre15g02185 985 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 340 635 - -
Trre15g02185 985 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Trre15g02185 985 SMART LRR_typ_2 463 487 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 559 582 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 122 145 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 511 535 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 267 291 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 439 462 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 242 266 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 146 169 IPR003591 -
Trre15g02185 985 SMART LRR_typ_2 583 607 IPR003591 -
Trre15g02185 985 Gene3D Phosphorylase Kinase; domain 1 683 775 - -
Trre15g02185 985 SUPERFAMILY L domain-like 374 623 - -
Trre15g02185 985 SMART serkin_6 700 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g02185 985 Gene3D Ribonuclease Inhibitor 313 640 IPR032675 -
Trre15g02185 985 SUPERFAMILY Protein kinase-like (PK-like) 681 972 IPR011009 -
Trre15g02185 985 Pfam Leucine Rich Repeat 148 170 IPR001611 GO:0005515
Trre15g02185 985 PANTHER OS04G0122200 PROTEIN 218 976 - -
Trre15g02185 985 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 29 185 - -
Trre15g02185 985 Pfam Leucine rich repeat 541 596 IPR001611 GO:0005515
Trre15g02185 985 Pfam Leucine rich repeat 441 499 IPR001611 GO:0005515
Trre15g02185 985 SUPERFAMILY L domain-like 31 332 - -
Trre15g02185 985 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 776 984 - -
Trre15g02185 985 Gene3D Ribonuclease Inhibitor 192 265 IPR032675 -
Trre15g02185 985 Gene3D Ribonuclease Inhibitor 266 312 IPR032675 -
Trre15g02185 985 Pfam Protein kinase domain 701 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02185 Trre-Chr15 17799872 17803319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02185 31 985 Receptor kinase-like Gene Family AT3G47570 37.816 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre15g02185 Pkinase 5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02185 - - mtr:25481440 1153.66