Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02176 ATGATGTTTGTGCCTTGGCTAGAAAAGTTGTTGGCAATCACAACCTTTTTCACAGCATGTGAAGTCCACTCCGACGAATCCAAAATTGAGTGTAACAAGTTCTGGTGCATCGATTGTTATGAGAATGCATTATGTCAATCTTGCATAACAACTAGTCACAAAGATCATCGAGTAATTCAAATAAGGAGGTTATCATATAATGAGGCAATCAAAACAAGTGAAATTTACAAGCATGTGGACATCCTTGGAATTCAGACATATCTTATTAATAACTCCACAGCCGTATTTATAAACAAGAGGCCTCTTCCACAACCTAAGAACAACAAGAATGGTAAAAATGGTTACACCAGCATCTCATGTTGTAAGACATGCAAAAGAAATCTCGTGGATTCTTCTTACTTTTGCTCTTTGGCATGCAAGTTTGAATATATAAAGAAGAATGGGGGCTTTTTCGTAAGCGCAAAAGAGATGGAAGAAATGAAAAGATTAATAGAGGAATCGATCAAGGAATCCCCACCAAAAGAAAGAGCAAAAAAATTACGTGAACAAAATCTAAAACTAAAAGTTGATGAATCAAGAATTGATGAAGAATATGAAGATGATGAAGAGAAAGAAGAGAAAGAAGAGAAAGAAGAAGATAATAAAGAAGAAAATGAAGACAACAAAGAAAGTGTTCTTCTTGTTACTCGTCCATCGACTTCATTTCGTAAGCCAAATTCAAGAAGAAAGGGAATACCTCATAGGGCTCCTTTTTATTAA 759 0.3505 MMFVPWLEKLLAITTFFTACEVHSDESKIECNKFWCIDCYENALCQSCITTSHKDHRVIQIRRLSYNEAIKTSEIYKHVDILGIQTYLINNSTAVFINKRPLPQPKNNKNGKNGYTSISCCKTCKRNLVDSSYFCSLACKFEYIKKNGGFFVSAKEMEEMKRLIEESIKESPPKERAKKLREQNLKLKVDESRIDEEYEDDEEKEEKEEKEEDNKEENEDNKESVLLVTRPSTSFRKPNSRRKGIPHRAPFY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02176 252 Coils Coil 191 224 - -
Trre15g02176 252 MobiDBLite consensus disorder prediction 194 216 - -
Trre15g02176 252 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 251 - -
Trre15g02176 252 MobiDBLite consensus disorder prediction 191 252 - -
Trre15g02176 252 Pfam PLATZ transcription factor 62 140 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02176 Trre-Chr15 17728718 17730427 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre15g02176 PLATZ 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02176 - - cam:101499108 296.975