LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre15g02166	ATGAAGATCATTATTCTCTTTTGCATCACCTTAACATGTGGTTTTCTTGGAAATGTTGTTTCGAATGATAATCCTCTCCCGTACGAAGCTATCTTCAACTTTGGTGATTCTATAAGTGACACTGGAAATGCTATGAAGAGCCTCGGCTCCATGCCTAGCAATAGTCCTTATGGGTCAACATACTTCAAACATCCAGCTGGTCGTTTATCGAACGGACGCCTAATCATAGATTTTATCGAGTGCGAGGACTACTTCAAAAAATCATTGTTTTTTGTTGGTGAGATCGGTGGAAATGATATTTTGTCGCATGTGCTCACAAATAAACCTGTTACAGAAATTCGAAAAATTGTGCCCTTGATGGTTGAAGAGATTGCAAATACTGCCTCTGCATTAATTGAAGAAGGAGTGACAGAGCTAGCAATTCCCGGTAACTTTCCAATCGGATGTAATGCTGCGTTTTTATCAATTGTGGATAGTAAGAATAAAGAAGACTATGATTTACTTGGATGTTTGATAGCTTACAATACTTTAGCGGAATACTTTAATGAGCAACTCAAAAATGCCATAGACACGTTACGAACGAACAACCCTCAAGCTAAGATAATATATTTTGATTACTACAATGATGCCAAACGTTTATATCAAGCATCGCAACAATATGGCTTTACTTCTGATAAGAACGAGATTTTGAAAGCATGTTGTGGATCAAGTGCACCATACAATGTTGATGTAAAGAAACCATGTGGAACTGCTGACACGGCGGTTTGTTCAGACCCTTCAAAGCAAATAAATTGGGACGGAGCACACTTAACAGAAGCTGCTTATAGAATGATTGCAAAGGGATTAGTCGAAGGCCCTTTTGCAAACCCTTCACTTAAAACTCCTCCTGTCAAGATAGCTTAG	903	0.3865	MKIIILFCITLTCGFLGNVVSNDNPLPYEAIFNFGDSISDTGNAMKSLGSMPSNSPYGSTYFKHPAGRLSNGRLIIDFIECEDYFKKSLFFVGEIGGNDILSHVLTNKPVTEIRKIVPLMVEEIANTASALIEEGVTELAIPGNFPIGCNAAFLSIVDSKNKEDYDLLGCLIAYNTLAEYFNEQLKNAIDTLRTNNPQAKIIYFDYYNDAKRLYQASQQYGFTSDKNEILKACCGSSAPYNVDVKKPCGTADTAVCSDPSKQINWDGAHLTEAAYRMIAKGLVEGPFANPSLKTPPVKIA	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre15g02166	300	Gene3D	SGNH hydrolase	19	80	IPR036514	-
	Trre15g02166	300	Gene3D	SGNH hydrolase	81	285	IPR036514	-
	Trre15g02166	300	PANTHER	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	27	79	-	-
	Trre15g02166	300	Pfam	GDSL-like Lipase/Acylhydrolase	83	280	IPR001087	GO:0016788
	Trre15g02166	300	SUPERFAMILY	SGNH hydrolase	33	282	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre15g02166	Trre-Chr15	17600513	17601748	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre15g02166	28	284	Pollen Coat Proteome	AT1G75910	24.390	3.74e-13	67.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre15g02166	-		-	mtr:25490884	315.849