Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02157 ATGATGTCATCTTCGTCAAGTGGTGGAGCATTCAGGCTTCGTTGGGATGTATTTTTGAGTTTCAGAGGAGAAAATACACGCAAATGTTTCACCAAAAAACTGTACGAATCTCTTCATCGTGAAGGAATTCGTGCTTTTATGGACGACGAGGGTTTGGATCGTGGTGACGACATACAAACAAGTTTGCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATTTCTAAAAACTATGCTGATTCTCATTGGTGTCTCGATGAACTCGCTAGGATTTGTGATTCAGGAAGGCTTGTTATTCCTGTTTTCTATATGGTTGATCCTTCTCATGTTAGGAAACAATTGGATCCTTTTAAAAAAGGTTTTGATGATCTTGAAATAAGGTTTCAAAATCAGAAAGATAAGGTTCAGAAATGGAGAGATTCTATGCTTAAAGTTGGTGGATATGCTGGTTTTGTTGTCAAAAATAATAGTGATGATGGCGAGCTTGAGAATCTGATACGCCGATTGGTACAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTGTCTGAGTTTGCAGTGGGTCTCAACAAACGTGTTGACAAGGTGATGGATTTATTACAAGTTCGATCCAACGGTGTTAAGGTTTTGGGGTTGTATGGGATGGGTGGTGTTGGTAAGACAACCCTAGCAAAGGCTCTTTTCAATAGTCTTGTTGGTCGTTTCGAGCGTAGATGCTTCGTTTCCGATGTGAGACAATTTTCATCTAAAGAAGATGGTTTGGTTTCTCTTCAAAGCAATGTCATTAAAGATCTTTCTCCTGAAGAAGGTGCTCGGAATGTTATCGGTGATGTCAATGCTGGTATATCTGTTATCAAAAGAATAATTCGTGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAATCAGCTTGATGCTTTGATTGGTAAAAGGGAGCGGTTTTATGAAGGAAGCTGTATAATAATTACAACAAGGGATATAACTGTTTTGCCTGAAAAACATGTCAATAAGTTGTATGAAGTTACAGAATTGGATACTGAAGAAGCTCTAGAGTTATTCAGTTACCATGCACTAAGGAAAAAGGAACCTCCACAAAATCTTCTGGATTTTTCAAATAAAATTGTGTCTCTTACAGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTTTGGTAAGAGAAGGGTGAAGGAATGGGAGGATGCTGTTGAGAAGCTGAGAACAATTCGCCCCGGGAGTCTTCATGATGTGTTGAAGATAAGTTATGATGGATTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCAAATGGGAACGAAGCGCGATGATGTGATTGATATATTGAGAGGTTGTGGTTTTAGTGGAGAGATAGCTATGACCAATCTTGTAGAGAAATGCTTAATCAAAATAAGACAGCATGACAATACCTTGTGGATGCATGATCAGATTAGAGATATGGGAAGACAGATTGTTCTTAATGAAAACCACGTCGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCGTACAAGGAATTGTGCTAGACTTTAAGGCAGGACCGAGTTATCCTCATCAACATCAAGCAGACAAAGTTATACTTGATACCAAATCTTTTGAACCAATGGTTAGCTTGAGATTGCTTCAGATCAATAATTTGAGTTTGGAAGGCAAGTTTTTGCCAGATGAACTGAAGTGGCTACAATGGCGAGGTTGTCCTTTAGAAGGCATACCTTTGGATACTTTGCCACGTGAACTGGCTATCCTCGATCTCTCAAATGGCCAGAAAATTAAAAGCTTGCGGGGATTTGAAAGTCACAAGGTACCAGAGAACCTAATGGCTATAAACCTCTCTGACTGCTACAGACTTGCTGCAATCCCTGATTTATCTTGGTGTCTCAAGCTAGAGAAAATTAATTTGGAGAGCTGCATTAATCTAAAAAGGATTCATGAATCAATTGGCAGTTTAACTACCTTGCGTAATTTGAATTTGACGCGTTGTAAAAAGCTTATTGAACTTCCTAGGGATATCTCTGGACTGAAACATTTGGAGAGCCTCTTTCTTTCTGAGTGCAAAATGTTGAAAGCATTACCAGAAAACATAGGTATTCTTAAATCTCTGAAAACACTTTTTGCGGATGACACAGCTATAGTAAAGTTGCCAGAGTCCATTTTCCGCCTGACAAAACTCGAACGACTTGTTTTAAATCGTTGCTATTATCTGATAAGACTACCAAACTGCATTGGAAAACCATGTTCATTGCAAGAATTATCTCTTGATCAATCAGGTTTACAAGAATTACCCGACACTGTCGGATCCTTGAAAAATCTTGAGAAATTAAGTTTGATTTGGTGTAAATCTCTCACACAAATGCCTGATTCCATAGGAAATCTTGAATCGTTAACAGAACTTTTGGCTTACAACAGTGGAATTAAAGAACTTCCTTCCACCATTGGTTGTTTATCCTATCTGAGTTCATTATCGGTCGGAGAGTGTAAGTTTCTCAGTACATTGCCTGACTCATTTAGATCTCTGGCATCAATTACTGAACTTCAGTTAGATGGAACATCTATCAGATGTCTTCCAGATGAAATTGGAGAAATGAAACAACTGAGGAAACTTGAGATTGGGAATTGTAGTAATCTAGAATCATTACCAGAATCCATTGGCCACCTAGCATCTCTTACTACACTGAACATAGTCAATGGAAATATAAGAGAATTGCCAGCATCGATTGGATTACTAGACAATCTTGTTACCTTAACATTGAACAAATGTAGAATGCTTAAACAGCTTCCAGCTTCTATAGGAAACCTGAAATCTCTATGTCACTTAAAGATGGAGGAAACAGCTATAAAAGACTTGCCTGAAAGTTTCGGTATGCTCTCAAGCCTGAGATCACTGAGAATGGCAAAGAGGCCTCATTTAGTTCCCATATCAATGGAGAACACTGGTTCTTTTGTGTTACCGTCTTCATTCTGTAATCTGACCTTGCTATATGAGTTGGATGCTCGTGCCTGGAGACTATCTGGGAAAATTCCGGATGATTTTGAGAAGCTGTCATTATTAGAGACTTTAAATTTGGGCCAAAACAATTTTCACAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTTTCTGAAGACGCTCTCACTGCCAAATTGCACAGAGCTGATTTCTCTCCCCTCACTTCCTTCAAGCTTGATCACGCTAAACGCTGATAACTGTTGTGCATTAGAAACAATACATGACATGTCAAATTTAGAGAGTTTGGAGGAGTTGAAACTCACAAATTGTGAGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAAAAGACTGTACTTGAGTGGTTGCAATGCATGCTCCTCTAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAATTACCTGAATGGTTTTCAGCAGAAACTGTAAGCTTTTCGAAGCGGAAAAATCTCGAGTTAACAAGTGTAGTTGTAGGTGTTATCGTTTCAATTAACCACAACATTGATATACCTATAAAGAGAGAAGAAATGCCTGGAATCATTGATGTTGAAGCAAGTGTTTTCAAACTTGGGAAACGAATATTTAATACAACTTTAAACATACTTGGGGTGCCAAGGACAAATGTAGATCACATTCACTTGTGTAGGTTCCAGAATTACCATCAATTGGTAGCCTTTTTAAAAGATGCTGATACATTTTGTGTGACCACGAGAAATCCTCCTTTCGATAAAGGATTGAAATTGAAGAAATGCGGAGTTCATTTAATCTTCGAAGGGGATGATGATTATGAGGGAGAAGAAGAATCGTTGGATGTAGGCTTACATTCTGTCTCGGAAAGGCTGGCCAGGTTTTTTAACACTTGTGATGAAGGTGTTGATGTCACCTATGAAACTGAGAGTGATGATAAGTTTCAACATGAATTGGAGCAAGAAAAAGAAGAGCATGGAATTAGATTACTTTCTGTTAAAGGAAATTCTATACTTCTCTTCCTGTTTAGTGTATCATTTGTGCTGTTGAGTTGGTTTTGGTTGAGCTGTATCTCAACTGCTGAAAGAAGAGACTGA 4200 0.3855 MMSSSSSGGAFRLRWDVFLSFRGENTRKCFTKKLYESLHREGIRAFMDDEGLDRGDDIQTSLLQAIDDSAASIVIISKNYADSHWCLDELARICDSGRLVIPVFYMVDPSHVRKQLDPFKKGFDDLEIRFQNQKDKVQKWRDSMLKVGGYAGFVVKNNSDDGELENLIRRLVQRVLKELSNTPMVVSEFAVGLNKRVDKVMDLLQVRSNGVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFVSDVRQFSSKEDGLVSLQSNVIKDLSPEEGARNVIGDVNAGISVIKRIIRENRVLLVLDDVDNVNQLDALIGKRERFYEGSCIIITTRDITVLPEKHVNKLYEVTELDTEEALELFSYHALRKKEPPQNLLDFSNKIVSLTGRMPLALEVFGCFLFGKRRVKEWEDAVEKLRTIRPGSLHDVLKISYDGLDEQEKCIFLDIACFFVQMGTKRDDVIDILRGCGFSGEIAMTNLVEKCLIKIRQHDNTLWMHDQIRDMGRQIVLNENHVDPGMRSRLWDRAEIMSVLKSKKGTRCVQGIVLDFKAGPSYPHQHQADKVILDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWRGCPLEGIPLDTLPRELAILDLSNGQKIKSLRGFESHKVPENLMAINLSDCYRLAAIPDLSWCLKLEKINLESCINLKRIHESIGSLTTLRNLNLTRCKKLIELPRDISGLKHLESLFLSECKMLKALPENIGILKSLKTLFADDTAIVKLPESIFRLTKLERLVLNRCYYLIRLPNCIGKPCSLQELSLDQSGLQELPDTVGSLKNLEKLSLIWCKSLTQMPDSIGNLESLTELLAYNSGIKELPSTIGCLSYLSSLSVGECKFLSTLPDSFRSLASITELQLDGTSIRCLPDEIGEMKQLRKLEIGNCSNLESLPESIGHLASLTTLNIVNGNIRELPASIGLLDNLVTLTLNKCRMLKQLPASIGNLKSLCHLKMEETAIKDLPESFGMLSSLRSLRMAKRPHLVPISMENTGSFVLPSSFCNLTLLYELDARAWRLSGKIPDDFEKLSLLETLNLGQNNFHSLPSSLKGLSFLKTLSLPNCTELISLPSLPSSLITLNADNCCALETIHDMSNLESLEELKLTNCEKVVDIPGLECLKSLKRLYLSGCNACSSKVCKRLSKVALRNFQNLSMPGTKLPEWFSAETVSFSKRKNLELTSVVVGVIVSINHNIDIPIKREEMPGIIDVEASVFKLGKRIFNTTLNILGVPRTNVDHIHLCRFQNYHQLVAFLKDADTFCVTTRNPPFDKGLKLKKCGVHLIFEGDDDYEGEEESLDVGLHSVSERLARFFNTCDEGVDVTYETESDDKFQHELEQEKEEHGIRLLSVKGNSILLFLFSVSFVLLSWFWLSCISTAERRD 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02157 1399 Gene3D Ribonuclease Inhibitor 1002 1202 IPR032675 -
Trre15g02157 1399 SMART till_3 14 150 IPR000157 GO:0007165
Trre15g02157 1399 Gene3D Ribonuclease Inhibitor 560 767 IPR032675 -
Trre15g02157 1399 SMART LRR_typ_2 781 803 IPR003591 -
Trre15g02157 1399 SMART LRR_typ_2 921 944 IPR003591 -
Trre15g02157 1399 SMART LRR_typ_2 733 756 IPR003591 -
Trre15g02157 1399 SMART LRR_typ_2 827 850 IPR003591 -
Trre15g02157 1399 SMART LRR_typ_2 1049 1071 IPR003591 -
Trre15g02157 1399 SMART LRR_typ_2 968 990 IPR003591 -
Trre15g02157 1399 SMART LRR_typ_2 874 897 IPR003591 -
Trre15g02157 1399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 445 IPR027417 -
Trre15g02157 1399 Gene3D Ribonuclease Inhibitor 768 1001 IPR032675 -
Trre15g02157 1399 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Trre15g02157 1399 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Trre15g02157 1399 SUPERFAMILY L domain-like 493 908 - -
Trre15g02157 1399 SUPERFAMILY L domain-like 871 1181 - -
Trre15g02157 1399 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 841 IPR044974 GO:0006952
Trre15g02157 1399 Pfam NB-ARC domain 195 421 IPR002182 GO:0043531
Trre15g02157 1399 Pfam TIR domain 15 180 IPR000157 GO:0007165
Trre15g02157 1399 SMART LRR_CC_2 661 688 IPR006553 -
Trre15g02157 1399 SMART LRR_CC_2 1116 1142 IPR006553 -
Trre15g02157 1399 SMART LRR_CC_2 897 924 IPR006553 -
Trre15g02157 1399 SMART LRR_CC_2 803 836 IPR006553 -
Trre15g02157 1399 SMART LRR_CC_2 850 877 IPR006553 -
Trre15g02157 1399 Gene3D - 1 147 IPR035897 -
Trre15g02157 1399 PRINTS Disease resistance protein signature 385 399 - -
Trre15g02157 1399 PRINTS Disease resistance protein signature 895 911 - -
Trre15g02157 1399 PRINTS Disease resistance protein signature 292 306 - -
Trre15g02157 1399 PRINTS Disease resistance protein signature 213 228 - -
Trre15g02157 1399 Gene3D - 350 435 IPR042197 -
Trre15g02157 1399 Gene3D - 161 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02157 Trre-Chr15 17493394 17500182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02157 15 856 WRKY Transcription Factor Family AT4G12020 29.548 5.25e-74 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02157 - - mtr:11408681 2254.94