Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02156 ATGATGTCATCTTCGTCAAGTGGTGGAGCATTCAGGCTTCGTTGGGATGTATTTTTGAGTTTCAGAGGAGAAAATACACGCAAATGTTTCACCAAAAAACTGTACGAATCTCTTCATCGTGAAGGAATTCGTGCTTTTATGGACGACGAGGGTTTGGATCGTGGTGACGACATACAAACAAGTTTGCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATTTCTAAAAACTATGCTGATTCTCATTGGTGTCTCGATGAACTCGCTAGGATTTGTGATTCAGGAAGGCTTGTTATTCCTGTTTTCTATATGGTTGATCCTTCTCATGTTAGGAAACAATTGGATCCTTTTAAAAAAGGTTTTGATGATCTTGAAATAAGGTTTCAAAATCAGAAAGATAAGGTTCAGAAATGGAGAGATTCTATGCTTAAAGTTGGTGGATATGCTGGTTTTGTTGTCAAAAATAATAGTGATGATGGCGAGCTTGAGAATCTGATACGCCGATTGGTACAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTGTCTGAGTTTGCAGTGGGACTCAACAAACGTGTTGACAAGGTGATGGATTTATTACAAGTTCGATCCAACGGTGTTAAGGTTTTGGGGTTGTATGGGATGGGTGGTGTTGGTAAGACAACCCTAGCAAAGGCTCTTTTCAATAGTCTTGTTGGTCGTTTTGAGCGTAGATGCTTTGTTTCCAATGTGAGACAATTTTCATCTAAAGAAGATGGTTTGGTTTCTCTTCAAAGCAATGTCATTAAAGATCTTTCTCCTGAAAATGCTCAGAGTGTTATCAGTGATGTCAATGCCTGTATATCTGTTATCAAAAGAATAATTCGTGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAATCAGCTTGATGCTTTAATTGGTAAAAGGGAGTGGTTTTATGAAGGAAGCTGTATAATAATTACAACAAGGGATATAACTGTTTTGCCTGAAAAACATGTCAATAAGTTGTATGAAGTTACAGAATTGGATACTGAAGAAGCTCTAGAGTTATTCAGTTACCATGCACTAAGGAAAAATGAACCTCCACAAAATCTTCTGGATTTTTCAAATAAAATTGTGTCTCTTACAGGAAGAATGCCATTGGCTTTGGAAGTGTTTGGTTGCTTTCTGTTTGGTAAGAGAAGGGAGAAGGAATGGGAGGATGCTGTTGAGAAGCTGAGAACAATTCGCCCCGGGAGTCTTCATGATGTGTTGAAGATAAGTTATGATGGATTGGATGAACAAGATAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCAAATGGGAACGAAGCGCGATGATGTGATTGATATATTGAGAGGTTGTGGTTTTAGTGGAGAGATAGCTATGACCAATCTTGTAGAGAAATGCTTAATCAAAATAAGACAGCATGACAATACCTTGTGGATGCATGATCAGATTAGAGATATGGGAAGACAGATTGTTCTTAATGAAAATCACGTCGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCGTACAAGGAATCGTGCTAGACTTTAAGGCAGGACCGAGTTATCCTCATCAACATCAAGCAGACAAAGTTATACTTGATACAAAATCTTTTGAACCAATGGTTAGCTTGAGATTGCTTCAGATCAATAATTTGAGTTTGGAAGGCAAGTTTCTGCCAGATGAACTGAAGTGGCTACAATGGCGAGGTTGTCCTTTAGAAGGCATACCTTTGGATACTTTGCCGCGTGAACTGGCTGTCCTCGATCTCTCAAATGGCCAGAAAATTAAAAGCTTGCGGGGATTTGAAAGTCACAAGGTACCAGAGAACCTAATGGCTATAAACCTCTCTGACTGCTACAGACTTGCTGCAATCCCTGATTTATCTTGGTGTCTCAAGCTAGAGAAAATTAATTTGGAGAGCTGCATTAATCTAAAAAGGATTCATGAATCAATTGGCAGTTTAACTACCTTGCGTAATTTGAATTTGACGCGTTGTAAAAAGCTTATTGAACTTCCTAGGGATATCTCTGGACTGAAACATTTGGAGAGCCTCTTTCTTTCTGAGTGCAAAATGTTGAAAGCATTACCAGAAAACATAGGTATTCTTAAATCTCTGAAAACACTTTTTGCGGATGACACAGCTATAGTAAAGTTGCCAGAGTCCATTTTCCGCCTGACAAAACTCGAACGACTTGTTTTAAATAGTTGCAAATATTTGACAAGACTACCAAACTGCATTGGAAAACTATGTTCATTGCAAGAATTATCTCTTAATCAATCAGGTTTACAAGAATTACCCAACACTGTTGGATCCTTGAAAAATCTTGAGAAATTAAGTTTGATTTGGTGTAAATCTCTCACTCAAATGCCTGATTCCATAGGAAATCTTGAATCGTTAACAGAACTTTTGGCTTACAGCAGTGGAATTAAAGAACTTCCTTCCACCATTGGTTGTTTATCCTATCTGAGGACGTTATCGGTCGGAGAGTGTAAGCTTCTCAGTACATTGCCTGATTCATTTAGTTCTCTGGCCTCAATTACTGAACTTCAGTTAGATGGAACACCTATCAGATATCTTCCAGATGAAATTGGAGAAATGAAACAACTGAGGAAACTTGAGATTGGGAATTGTAGTAATCTAGAATCATTACCAGAATCCATTGGCCACCTAGCATCTCTTACTACACTGAACATAGTCAATGGAAATATAAGAGAATTGCCAGCATCGATTGGATTACTAGACAATCTTGTTACCTTAACATTGAACAAATGTAGAATGCTTAAACAGCTTCCAGCTTCTATAGGAAACCTGAAATCTCTATGTCACTTAAAGATGGAGGAAACAGCTATAAAAGACTTGCCTGAAAGTTTCGGTATGCTCTCAAGCCTGAGATCACTGAGAATGGCAAAGAGGCCTCATTTAGTTCCCATATCAATGGAGAACACTGGTTCTTTTGTGTTACCGTCTTCATTCTGTAATCTGACCTTGCTATATGAGTTGGATGCTCGTGCCTGGAGACTATCTGGGAAAATTCCGGATGATTTTGAGAAGCTGTCATTATTAGAGACTTTAAATTTGGGCCAAAACAATTTTCACAGCCTTCCTTCCAGTTTGAAAGGTCTTTCCTTTCTGAAGACGCTCTCACTGCCAAATTGCACAGAGCTGATTTCTCTCCCCTCACTTCCTTCAAGCTTGATCACGCTAAACGCTGATAACTGTTGTGCATTAGAAACAATACATGACATGTCAAATTTAGAGAGTTTGGAGGAGTTGAAACTCACAAATTGTGAGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCCTTGAAAAGACTGTACTTGAGTGGTTGCAATGCATGCTCCTCTAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAATTACCTGAATGGTTTTCAGCAGAAACTGTAAGCTTTTCGAAGCGGAAAAATCTCGAGTTAACAAGTGTAGTTGTAGGTGTTATCGTTTCAATTAACCACAACATTGATATACCTATAAAGAGAGAAGAAATGCCTGGAATCATTGATGTTGAAGCAAGTGTTTTCAAACTTGGGAAACGAATATTTAATACAACTTTAAACATACTTGGGGTGCCAAGGACAAATGTAGATCACATTCACTTGTGTAGGTTCCAGAATCACCATCAATTGGTAGCCTTTTTAAAAGATGCTGATACATTTTGTGTGACCACGAGAAATCCTCCTTTCGATAAAGGATTGAAATTGAAGAAATGCGGAGTTCATTTAATCTTCGAAGGGGATGATGATTATGAGGGAGAAGAAGAATCGTTGGATGTAGGCTTACATTCTGTCTCGGAAAGGCTGGCCAGGTTTTTTAACACTTGTGATGAAGGTGTTGATGTCACCTATGAAACTGAGAGTGATGATAAGTTTCAACATGAATTGGAGCAAGAAAAAGAAGAGCATGGAATTAGATTACTTTCTGTTAAAGGAAATTCTATACTTCTCTTCCTGTTTAGTGTATCATTTGTGCTGTTGAGTTGGTTTTGGTTGAGGTGTATCTCAAGTGCTGAAAGAAGAGACTGA 4197 0.3836 MMSSSSSGGAFRLRWDVFLSFRGENTRKCFTKKLYESLHREGIRAFMDDEGLDRGDDIQTSLLQAIDDSAASIVIISKNYADSHWCLDELARICDSGRLVIPVFYMVDPSHVRKQLDPFKKGFDDLEIRFQNQKDKVQKWRDSMLKVGGYAGFVVKNNSDDGELENLIRRLVQRVLKELSNTPMVVSEFAVGLNKRVDKVMDLLQVRSNGVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFVSNVRQFSSKEDGLVSLQSNVIKDLSPENAQSVISDVNACISVIKRIIRENRVLLVLDDVDNVNQLDALIGKREWFYEGSCIIITTRDITVLPEKHVNKLYEVTELDTEEALELFSYHALRKNEPPQNLLDFSNKIVSLTGRMPLALEVFGCFLFGKRREKEWEDAVEKLRTIRPGSLHDVLKISYDGLDEQDKCIFLDIACFFVQMGTKRDDVIDILRGCGFSGEIAMTNLVEKCLIKIRQHDNTLWMHDQIRDMGRQIVLNENHVDPGMRSRLWDRAEIMSVLKSKKGTRCVQGIVLDFKAGPSYPHQHQADKVILDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWRGCPLEGIPLDTLPRELAVLDLSNGQKIKSLRGFESHKVPENLMAINLSDCYRLAAIPDLSWCLKLEKINLESCINLKRIHESIGSLTTLRNLNLTRCKKLIELPRDISGLKHLESLFLSECKMLKALPENIGILKSLKTLFADDTAIVKLPESIFRLTKLERLVLNSCKYLTRLPNCIGKLCSLQELSLNQSGLQELPNTVGSLKNLEKLSLIWCKSLTQMPDSIGNLESLTELLAYSSGIKELPSTIGCLSYLRTLSVGECKLLSTLPDSFSSLASITELQLDGTPIRYLPDEIGEMKQLRKLEIGNCSNLESLPESIGHLASLTTLNIVNGNIRELPASIGLLDNLVTLTLNKCRMLKQLPASIGNLKSLCHLKMEETAIKDLPESFGMLSSLRSLRMAKRPHLVPISMENTGSFVLPSSFCNLTLLYELDARAWRLSGKIPDDFEKLSLLETLNLGQNNFHSLPSSLKGLSFLKTLSLPNCTELISLPSLPSSLITLNADNCCALETIHDMSNLESLEELKLTNCEKVVDIPGLECLKSLKRLYLSGCNACSSKVCKRLSKVALRNFQNLSMPGTKLPEWFSAETVSFSKRKNLELTSVVVGVIVSINHNIDIPIKREEMPGIIDVEASVFKLGKRIFNTTLNILGVPRTNVDHIHLCRFQNHHQLVAFLKDADTFCVTTRNPPFDKGLKLKKCGVHLIFEGDDDYEGEEESLDVGLHSVSERLARFFNTCDEGVDVTYETESDDKFQHELEQEKEEHGIRLLSVKGNSILLFLFSVSFVLLSWFWLRCISSAERRD 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02156 1398 SMART LRR_CC_2 1115 1141 IPR006553 -
Trre15g02156 1398 SMART LRR_CC_2 802 835 IPR006553 -
Trre15g02156 1398 SMART LRR_CC_2 660 687 IPR006553 -
Trre15g02156 1398 SMART LRR_CC_2 849 879 IPR006553 -
Trre15g02156 1398 SMART LRR_CC_2 896 923 IPR006553 -
Trre15g02156 1398 SMART LRR_typ_2 873 896 IPR003591 -
Trre15g02156 1398 SMART LRR_typ_2 920 943 IPR003591 -
Trre15g02156 1398 SMART LRR_typ_2 779 802 IPR003591 -
Trre15g02156 1398 SMART LRR_typ_2 732 755 IPR003591 -
Trre15g02156 1398 SMART LRR_typ_2 1048 1070 IPR003591 -
Trre15g02156 1398 SMART LRR_typ_2 967 989 IPR003591 -
Trre15g02156 1398 SMART LRR_typ_2 826 849 IPR003591 -
Trre15g02156 1398 SMART till_3 14 150 IPR000157 GO:0007165
Trre15g02156 1398 Pfam NB-ARC domain 195 420 IPR002182 GO:0043531
Trre15g02156 1398 PRINTS Disease resistance protein signature 384 398 - -
Trre15g02156 1398 PRINTS Disease resistance protein signature 213 228 - -
Trre15g02156 1398 PRINTS Disease resistance protein signature 894 910 - -
Trre15g02156 1398 PRINTS Disease resistance protein signature 291 305 - -
Trre15g02156 1398 SUPERFAMILY L domain-like 492 907 - -
Trre15g02156 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Trre15g02156 1398 Gene3D Ribonuclease Inhibitor 552 722 IPR032675 -
Trre15g02156 1398 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Trre15g02156 1398 Gene3D - 349 434 IPR042197 -
Trre15g02156 1398 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 786 IPR044974 GO:0006952
Trre15g02156 1398 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Trre15g02156 1398 Pfam TIR domain 15 180 IPR000157 GO:0007165
Trre15g02156 1398 Gene3D Ribonuclease Inhibitor 723 1001 IPR032675 -
Trre15g02156 1398 Gene3D Ribonuclease Inhibitor 1002 1201 IPR032675 -
Trre15g02156 1398 SUPERFAMILY L domain-like 888 1180 - -
Trre15g02156 1398 Gene3D - 1 147 IPR035897 -
Trre15g02156 1398 Gene3D - 157 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02156 Trre-Chr15 17477895 17484965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02156 15 855 WRKY Transcription Factor Family AT4G12020 29.316 5.07e-75 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02156 - - mtr:11408681 2257.26