Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02155 ATGAAAACGATGATGACGTCATCTTCGTCAAGTGGTGTAGCATTCAGGCTTCGTTGGGATGTATTTTTAAGTTTCAGAGGAGAAAATACACGCAAATGTTTCACCAAAAAACTGTACGAATCTCTTCATCGTGAAGGAATTCGTGCTTTCATGGACGACGAGGGTTTGGATCGTGGTGATGACATACAAACAAGTTTGCTTCAAGCCATTGATGACTCTGCTGCTTCCATTGTTATTATTTCTAAAAACTATGCTGATTCTCATTGGTGTCTTGATGAACTCGCCAGGATTTGTGATTCAGGAAGGCTTGTTATTCCTGTTTTCTATATGGTTGACCCTTCTCATGTTAGGAAACAATTGGATCCTTTTAAAAAAGGTTTTGATGATCTTGAAATAAGGTTTCAAAATCAGAAAGATAAGGTTCAGAAATGGAGAGATTCTATGCTTAAAGTTGGTGGATTTGCTGGTTTTGTTGTCAAAAATAATAGTGATGATGGCGAGCATGAGAATCTGATACGCCGATTGGTACAAAGGGTTTTGAAGGAGTTAAGTAATACTCCAATGGTTGTGTCTGAGTTTGCAGTGGGTCTCAACAAACGTGTTGACAAGGTGATGGATTTATTACAAGTTCGATCCAACGGTGTTAAGGTTTTGGGGTTGTATGGGATGGGTGGTGTTGGTAAGACAACCCTAGCAAAGGCTCTTTTCAATAGTCTTGTTGGTCGTTTCGAGCGTAGATGCTTCGTTTCCGATGTGAGACAATTTTCATCTAAAGAAGATGGTTTGGTTTCTCTTCAACGCAATGTCATTAAAAATCTTTCTCCTGAAAATGCTCAGAGTGTTATTGGTGATGTCAATGCTGGTATATCTGTTATCAAAAGAATAATTCGTGAAAATCGAGTTCTGCTAGTGTTGGATGATGTTGATAATGTAAATCAGCTTGATGCTTTGATTGGTAAAAGGGAGCGGTTTTATGAAGGAAGCTGTATAATAATTACAACAAGGGATATAACTGTTTTGCCTAAAAAACATGTCAATAAGTTGTATGAAGTTACAGAATTGGATACTGAAGAAGCTCTAGAGTTATTCAGTTACCATGCACTAAGGAAAAAGGAACCTCCACAAAATCTTCTGGATTTTTCAAATAAAATTGTGTCTCTTACAGGAAGAATGCCATTGGCTTTGGAGGTGTTTGGTTGCTTTCTGTTTGGTAAGAGAAGGGAGAAGGAATGGGAGGATGCTGTTGAGAAGCTGAGAACAATTCGCCCCGGGAGTCTTCATGATGTGTTGAAGATAAGTTATGATGGATTGGATGAACAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTCTTTGTTCAAATGGGAACGAAGCGCGATGATGTGATTGATATATTGAGAGGTTGTGGTTTTAGTGGAGAGATAGCTATGACCAATCTTGTAGAGAAATGCTTAATCAAAATAAGACAGCATGACAATACCTTGTGGATGCATGATCAGATTAGAGATATGGGAAGACAGATTGTTCTTAATGAAAATCACGTCGATCCTGGGATGCGTAGTAGATTGTGGGATCGTGCTGAAATCATGTCTGTTTTGAAGAGTAAGAAGGGAACAAGATGCGTACAAGGAATCGTGCTAGACTTTAAGGCAGGACCGAGTTATCCTCATCAACATCAAGCAGACAAAGTTATACTTGATACAAAATCTTTTGAACCAATGGTTAGCTTGAGATTGCTTCAGATCAATAATTTGAGTTTGGAAGGCAAGTTTCTGCCAGATGAACTGAAGTGGCTACAATGGCGAGGTTGTCCTTTAGAAGGCATACCTTTGGATACTTTGCCGCGTGAACTGGCTGTCCTCGATCTCTCAAATGGCCAGAAAATTAAAAGCTTGCGGGGATTTGAAAGTCACAAGGTACCAGAGAACCTAATGGTTATAAACCTCTCCGACTGCTACAGACTTGCTGCAATCCCTGATTTATCTTGGTGTCTCAAGCTAGAGAAAATTAACTTGGAGAGCTGCATTAATCTAAAAAGGATTCATGAATCAATTGGCAGTTTAACTACCTTGCGTAATTTGAATTTGACGCGTTGTGAAAAGCTTATTGAACTTCCTAGTGATATCTCTGGACTGAAACATTTGGAGAGCCTCTTTCTTTCTAAGTGCTACATGTTGAAAGCATTACCAGAAAACATAGGTATTCTTAAATCTCTGAAAACACTTTTTGCCGATGAAACTGATATAGTAAAGTTGCCAGAGTCCATTTTCCGCCTGACAAAACTCGAACGACTTGTTTTAAATAGTTGCAAATATTTGACAAGACTACCAAACTGCATTGGAAAACTATGTTCATTGCAAGAATTATCTCTTAATCAATCAGGTTTACAAGAATTACCCAACACTGTCGGATCCTTGAAAAATCTTGAGAAATTAAGTTTGATTTGGTGTAAATCTCTCACTCAAATGCCTGATTCCATAGGAAATCTTGAATCGTTAACAGAACTTTTGGCTTACAGCAGTGGAATTAAAGAACTTCCTTCCACCATTGGTTCTTTATCCTATCTGAGGACGTTATCGGTCGGAGAGTGTAAGCTTCTCAGTACATTGCCTGATTCATTTAGTTCTCTGGCCTCAATTACTGAACTTCAGTTAGATGGAACACCTATCAGATATCTTCCAGATGAAATTGGAGAAATGAAACAACTGAGGAAACTTGAGATTGGGAATTGTAGTAATCTAGAATCATTACCAGAATCCATTGGCCACCTTGCATCTCTTACTACACTGAACATAGTCAATGGAAATATAAGAGAATTGCCAGCATCGATTGGATTACTAGACAATCTTGTTACCTTAACATTGAACCAATGTAGAATGCTTAAACAGCTTCCAGCATCTATAGGAAACCTGAAATCTCTATGTCACTTAATGATGGATGGAACATCTATGTCAGACTTGCCTGAAAGTTTTGGTATGCTCTCAGGCCTGAGATCACTGAGAATGGCAAACAAGCCTGATTTAGTTCCCAAATCTGTGGAGAACACCGGCTCTTTTGTGCTACCGTCTTCTTTCTGTAATCTGACCTTGCTATATGAGTTCAATGCCTGTGCTTGGAGATTATCTGGGAAAATTCCGGACGATTTCGAGAAGCTGTCATTATTAGAGACTTTAAATTTGAGCCACAACAATTTTCATAGCCTTCCTTCCAGCTTGAAAGGTCTTTCCATTCTTAAGATATTCAAGCTTCAGAATTGCACGGAGCTGATATCTCTCCCCTCACTTCCTTCAAGTTTGATCGAGCTAAACGCTGATAATTGCTACGCGTTAGAAACTATACAAGACATGTCAAATTTAGAGACTTTGGAGGAGTTGAAACTCACTAATTGCGAGAAAGTGGTGGATATTCCAGGTCTTGAATGCTTAAAGTCCTTGAAAAGATTGTACCTAAGTGGTTGCAATGCATGCTCTTCCAAAGTATGCAAAAGACTTTCAAAGGTTGCACTGAGAAATTTTCAGAACTTGAGCATGCCAGGAACCAAGTTGCCTGAATGGTTTTCAGGAAAAACTGTAAGCTTTTCCAAGCACAAAAATCTCGAGCTAACAAGTGTAGTAGTAGGTGTTATTTTTTCAATTAACCGAAAAAATATGGAAAGTCAAATTCCTGAGGTGGTTGATGTTCAAGCAAAGGTTCTCAAACTAGGCAATCAAATTTTTAGTTCAGTGCTATACATAGGTGGAGTGCCAAGGACAGATGAAAAACAGATACACTTGCGAAGGTTTAAATATTACCATCCATTGGTAAACCTTTTAAAAGATGCTGATACAGTTTGTGTGACAAAGAGAAATCCTCCTTTTGATGAGAGGCTGGAGTTGAAAAAATGTGGAATTCATTTAATCTTTGAAGGGGATGATGATTATGAGGGAGACGAAGAGTCGTTGGACAAAGGCCAACAATCTGTCTCAGAAAGGTTGGCCAGGTTTTTTAACACTTGTGATGAAGGTGTTGATGACACCGAGAGTGAAGATGATCAGTGTCAACATGAACTGGAGCAGGAAAAAGAAGAGCCTGAAACTAGATTACTTGGTTTTAAAGGAAGTTCCATTCTTTCTTTCCTGCTTAGTCTATTCTTTGTGCTGTTGGGTTTGTTTTGGTTTAGGTGTATGTCTAGTCCTTTGGAATGA 4185 0.3866 MKTMMTSSSSSGVAFRLRWDVFLSFRGENTRKCFTKKLYESLHREGIRAFMDDEGLDRGDDIQTSLLQAIDDSAASIVIISKNYADSHWCLDELARICDSGRLVIPVFYMVDPSHVRKQLDPFKKGFDDLEIRFQNQKDKVQKWRDSMLKVGGFAGFVVKNNSDDGEHENLIRRLVQRVLKELSNTPMVVSEFAVGLNKRVDKVMDLLQVRSNGVKVLGLYGMGGVGKTTLAKALFNSLVGRFERRCFVSDVRQFSSKEDGLVSLQRNVIKNLSPENAQSVIGDVNAGISVIKRIIRENRVLLVLDDVDNVNQLDALIGKRERFYEGSCIIITTRDITVLPKKHVNKLYEVTELDTEEALELFSYHALRKKEPPQNLLDFSNKIVSLTGRMPLALEVFGCFLFGKRREKEWEDAVEKLRTIRPGSLHDVLKISYDGLDEQEKCIFLDIACFFVQMGTKRDDVIDILRGCGFSGEIAMTNLVEKCLIKIRQHDNTLWMHDQIRDMGRQIVLNENHVDPGMRSRLWDRAEIMSVLKSKKGTRCVQGIVLDFKAGPSYPHQHQADKVILDTKSFEPMVSLRLLQINNLSLEGKFLPDELKWLQWRGCPLEGIPLDTLPRELAVLDLSNGQKIKSLRGFESHKVPENLMVINLSDCYRLAAIPDLSWCLKLEKINLESCINLKRIHESIGSLTTLRNLNLTRCEKLIELPSDISGLKHLESLFLSKCYMLKALPENIGILKSLKTLFADETDIVKLPESIFRLTKLERLVLNSCKYLTRLPNCIGKLCSLQELSLNQSGLQELPNTVGSLKNLEKLSLIWCKSLTQMPDSIGNLESLTELLAYSSGIKELPSTIGSLSYLRTLSVGECKLLSTLPDSFSSLASITELQLDGTPIRYLPDEIGEMKQLRKLEIGNCSNLESLPESIGHLASLTTLNIVNGNIRELPASIGLLDNLVTLTLNQCRMLKQLPASIGNLKSLCHLMMDGTSMSDLPESFGMLSGLRSLRMANKPDLVPKSVENTGSFVLPSSFCNLTLLYEFNACAWRLSGKIPDDFEKLSLLETLNLSHNNFHSLPSSLKGLSILKIFKLQNCTELISLPSLPSSLIELNADNCYALETIQDMSNLETLEELKLTNCEKVVDIPGLECLKSLKRLYLSGCNACSSKVCKRLSKVALRNFQNLSMPGTKLPEWFSGKTVSFSKHKNLELTSVVVGVIFSINRKNMESQIPEVVDVQAKVLKLGNQIFSSVLYIGGVPRTDEKQIHLRRFKYYHPLVNLLKDADTVCVTKRNPPFDERLELKKCGIHLIFEGDDDYEGDEESLDKGQQSVSERLARFFNTCDEGVDDTESEDDQCQHELEQEKEEPETRLLGFKGSSILSFLLSLFFVLLGLFWFRCMSSPLE 1394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02155 1394 SUPERFAMILY L domain-like 497 1002 - -
Trre15g02155 1394 Gene3D Ribonuclease Inhibitor 562 679 IPR032675 -
Trre15g02155 1394 Gene3D Ribonuclease Inhibitor 680 1009 IPR032675 -
Trre15g02155 1394 Pfam TIR domain 19 186 IPR000157 GO:0007165
Trre15g02155 1394 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 185 - -
Trre15g02155 1394 Coils Coil 1336 1356 - -
Trre15g02155 1394 Pfam NB-ARC domain 199 424 IPR002182 GO:0043531
Trre15g02155 1394 SMART till_3 18 154 IPR000157 GO:0007165
Trre15g02155 1394 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 448 IPR027417 -
Trre15g02155 1394 PRINTS Disease resistance protein signature 388 402 - -
Trre15g02155 1394 PRINTS Disease resistance protein signature 898 914 - -
Trre15g02155 1394 PRINTS Disease resistance protein signature 295 309 - -
Trre15g02155 1394 PRINTS Disease resistance protein signature 217 232 - -
Trre15g02155 1394 SUPERFAMILY L domain-like 1020 1201 - -
Trre15g02155 1394 ProSiteProfiles Leucine-rich repeat profile. 1054 1076 IPR001611 GO:0005515
Trre15g02155 1394 ProSiteProfiles TIR domain profile. 17 180 IPR000157 GO:0007165
Trre15g02155 1394 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 156 IPR035897 -
Trre15g02155 1394 Gene3D - 17 181 IPR035897 -
Trre15g02155 1394 Gene3D - 182 348 IPR027417 -
Trre15g02155 1394 SUPERFAMILY L domain-like 571 674 - -
Trre15g02155 1394 Gene3D - 353 438 IPR042197 -
Trre15g02155 1394 Gene3D Ribonuclease Inhibitor 1011 1205 IPR032675 -
Trre15g02155 1394 SMART LRR_CC_2 853 883 IPR006553 -
Trre15g02155 1394 SMART LRR_CC_2 900 927 IPR006553 -
Trre15g02155 1394 SMART LRR_CC_2 806 839 IPR006553 -
Trre15g02155 1394 SMART LRR_CC_2 664 691 IPR006553 -
Trre15g02155 1394 SMART LRR_typ_2 971 993 IPR003591 -
Trre15g02155 1394 SMART LRR_typ_2 877 900 IPR003591 -
Trre15g02155 1394 SMART LRR_typ_2 830 853 IPR003591 -
Trre15g02155 1394 SMART LRR_typ_2 783 806 IPR003591 -
Trre15g02155 1394 SMART LRR_typ_2 924 947 IPR003591 -
Trre15g02155 1394 SMART LRR_typ_2 1052 1074 IPR003591 -
Trre15g02155 1394 SMART LRR_typ_2 736 759 IPR003591 -
Trre15g02155 1394 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 790 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02155 Trre-Chr15 17467057 17474223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02155 19 859 WRKY Transcription Factor Family AT4G12020 29.234 5.38e-75 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02155 - - mtr:11408681 2108.57