Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02151 ATGGAGATAAATGAATGTGAACCAATTGAAACCGATGAACCCAGAGATATTTTTCTCGGTCAAGTTGTAAATAGCAAAGAAGAAGCTTATGATTTATACCAAGAACATGCCTTCAAAGTTGGTTTTAGTGTAAGAAAGGGGAAGGAATGTTATTATGATAATGAGAAAAAGAATACACGGTTGAAAGAGTTTTATTGTTCCAAACAAGGGTTCAAGAACAATGAACCTGATGGTGAAGTGGCTTATAAAAGAGCAGATTCAAGAACAAATTGTAAAGCTATGGTGAGATTTAATGTGACCAAGGAAGGAGTGTGGAAAGTTACAAAGTTGATATTGAAACACAATCATGAATTTGTTCCGCTTCATCAAAGATATTTGTTACGTTCTATGAGAAATATGTCAAATCTCAAAGAAGACCGCATAAAGTCTATGGTTAATGATGCTATTAGGGTTACAAATATTGGGAGTTATTTAGGGTCAGAAGTTGGTGGATTTGACAAACATGGTGTAATGTTGAAAGATATGCATAATTATGTCTCCACTGAAAAGTTGAAATTTATTGAAGCCGGAGAGGCTCAATCTTTACTAAATCACTTACAAAATAGACAAGCGCAAGATTCCATGTTCTATTACAGTGTGCAGTTAGACCAAGAATCACGTTTGACCAATGTCTTCTGGAGAGATGGTAAATCTGTAGTTGATTATAATTGCTTTGGGGATGTTGTGATTTTTGACACTACTTATCGTGCTAATAAATACAACCTTATTTGTGCCCCATTTGTTGGTGTAAATCATCATTTGCAAAATATCATGTTTGGTTGTGCTTTGTTATTTGATGAAAGTGAAGTTTCTTTTGCTTGGTTGTTCAAAACGTTTTTGGAGAGTATGGGAAACCAACAACCAAAAACAATCTTTACAGCTCATGATCCAGCCATAGCTAAAGCGATTGGAGAAGTAATGCCAAATGCATGTCATCGTTTATGTTTATGGCACATAGCTAAGATTGCCCCTTCACATTTGGATTCTCTCATTTCCGATCAAACATTTCAAAGCTTATTTAGTAAATGCATGGGAGATTGTGATTCAGAAGAAGAATTTCAAAGAACTTGGGATGAGATGATGAATGTGTATAAGCTTCAAGATCATCAATGGTTGAGCAATATGTATGAAATTCGCCATAACTGGAGCACTGCTTATAGCAAGAATTTATTCTCTGCTGGTATCAAGTCCTGCCAAAGGATTGAGAGTACAAACAACGTGTTGGATGAGATTGCAGGGAAAACAACAACTCTGACACAATTTTTACTGGCATTTGAGAAGATGTTGAAAAAGTGGCGCCGCTTAGAGGTTGAGGAGGAGTTCAAAAACAGCCAAAGTACACCTCCTCTTGTTATAAACATTAGTGAAACACTACGGCATGCATCTACCGTATATACTCACAAAGTCTTCAATCTTTTTCTGAACGAGTATCTTGAAGGGACAGGTGGAAGCACTTCTATAGAGATTGGTCAATCTGATAATGTGTCAAATCATGAAGTCATGCTGAACAATAAGCCTAATAAAAAATATACAGTGACATTTGACTCTTCGGATATGAAGATTAATTGTAGTTGCTGCAAGTTTGATTCTTTGGGCATTCTTTGTAGTCATGCTCTGCGAATTTATAACATCAAAGGTATTTTAAGAATACCTGACCAATACTTCTTAAAAAGATGGTCAAAAAATGCAAGGTCTGTGATTTATGACCACATAACTAGGGCCATGGGAGAAGATTCTACCTCCAATTCGGGGATCAATGATGGAGATGCCGGTATTCTTTATCGCAATGCTATTATGAAGTCATTCTACTATCTAGTTTTGGAAAGTCAAGACAGCAAAGAAGCTCAAAATATTATGTGGAAATTACTTGATATTGGAGTTGAGAGGGTGCGGAAAGGTGTCGGCAAGGGAAATTTAACTTCATATGAAGAAACAACGGAGACAAATTTCAACGAAAATGAGGAATCGTGCTTCACACCGATGGTCTGA 2028 0.3639 MEINECEPIETDEPRDIFLGQVVNSKEEAYDLYQEHAFKVGFSVRKGKECYYDNEKKNTRLKEFYCSKQGFKNNEPDGEVAYKRADSRTNCKAMVRFNVTKEGVWKVTKLILKHNHEFVPLHQRYLLRSMRNMSNLKEDRIKSMVNDAIRVTNIGSYLGSEVGGFDKHGVMLKDMHNYVSTEKLKFIEAGEAQSLLNHLQNRQAQDSMFYYSVQLDQESRLTNVFWRDGKSVVDYNCFGDVVIFDTTYRANKYNLICAPFVGVNHHLQNIMFGCALLFDESEVSFAWLFKTFLESMGNQQPKTIFTAHDPAIAKAIGEVMPNACHRLCLWHIAKIAPSHLDSLISDQTFQSLFSKCMGDCDSEEEFQRTWDEMMNVYKLQDHQWLSNMYEIRHNWSTAYSKNLFSAGIKSCQRIESTNNVLDEIAGKTTTLTQFLLAFEKMLKKWRRLEVEEEFKNSQSTPPLVINISETLRHASTVYTHKVFNLFLNEYLEGTGGSTSIEIGQSDNVSNHEVMLNNKPNKKYTVTFDSSDMKINCSCCKFDSLGILCSHALRIYNIKGILRIPDQYFLKRWSKNARSVIYDHITRAMGEDSTSNSGINDGDAGILYRNAIMKSFYYLVLESQDSKEAQNIMWKLLDIGVERVRKGVGKGNLTSYEETTETNFNENEESCFTPMV 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02151 675 ProSiteProfiles Zinc finger SWIM-type profile. 523 559 IPR007527 GO:0008270
Trre15g02151 675 Pfam SWIM zinc finger 523 554 IPR007527 GO:0008270
Trre15g02151 675 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 643 IPR031052 GO:0006355
Trre15g02151 675 Pfam MULE transposase domain 241 334 IPR018289 -
Trre15g02151 675 Pfam FAR1 DNA-binding domain 32 120 IPR004330 -
Trre15g02151 675 SMART 26again6 534 561 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02151 Trre-Chr15 17454945 17456972 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre15g02151 MULE 3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02151 - - tpra:123905334 976.081