Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02121 ATGGCTTTCAATGTGATCCTTTTTTTGTGTCTTGTTTTTCATATATTTTTAATACAAACATGTTATTGCCAAAACAATTCTCCTCAAAACATAGAAACTTTGTATCCAAATGAAACTTTAGCTTCACCACCAACAAATCAACCACCTAAGACACAACCATCATTTTCATCACCACCACCTCAAGGACTAATCGCGGTATCGAAAAGTAGTTCATCAAATGGTAAGATAGCAAAAGCTGTGGCTGCAACTGCAGCAAGTACTATAGTTATTTGTGGTTTAATCTTCATTTTAGCTAAAAGGTGTATAAGGAAAAGAAAGAGATCAAGAGAGATAGTAAATAACATTGTTGTTGATGGAGATAGGCAACAAGTTATTGTGCCTAAAGGGAATGTTTTTGAAAAAATTGATGGAAATGTGAGAGGTTTAATTGTTGATGAAGATGGTTTAGATGTGATTTATTGGAGAAAACTTGAAGAGAAGAATTCAAATAAGGATCTTTATAAAGATATCTTGAATAGTCCAAAAAACAAAGAAGAAATTGAAGATAGTCATGAAGAAGAAGAAAATAAAGTGAAAAAATCTAAGTCCATTCAAGAAATTCCTCTTCTTAGAGGAAAATCTTCATCCTCACACTTGAATTTATATCAAGAAGAGAATGATCTATATAGAGTTCCAAGAATTCAATCTCAATCATCCAAAAACAATGTTGTTCAGAAACAAGATTTTCAATCTCTACCATCCAAAAATGATGTTGTTCATAAACAAGATTTTGAATCTCAATCTCAACCATCCATTCTACCATCAATTTCAGCAGGTGCAGCAGCACCACCTGCACCTCCTCCTCCAATTCCAGCTAGGAAGAGTCAAGCACCACCACCACCTCCTCCGATGAAGACGAGTACTTCGAGTTCATCATCAAAAGCTATCTCTCAAAGCAATCAAAGAAACTCTTCAGGGAAAGGTGTAGAAGAATCCAACAATGATCAAGTGAAATTGAAACCTTTGCATTGGGATAAAGTGAATACTAATGCTGCTGATCATTCCATGGTTTGGGACAAAGTTGATCGCGGCTCATTCAGGGTTGATCAAAATCTTATGGAAGCACTCTTTGGTTATGTCGCGACCAACCGATTGTCGCCTAAACGAAATACTGAATCAACCAGTCAAAGCAATGATCCCTCAACAAAAATTTTCATTCTTGATCCTAGAAAGTCACAAAACATAGCTATTGTTTTGAAATCTCTAGCCGTCTCACGAGACGAAATTCTTGATGCACTCATTGATGGAAAAGGCCTCAATTCAGATACACTTGAAAAGCTTACAAGAGTTTCACCAACAGAAGAAGAGAAATCACTTATCCTTCAATATAAAGAAGATCCATCTAGACTAGCTGCAGCAGAATCATTCCTATATCACATCCTTAAAGCCATTCCTTCCGCGTTTAATCGCTTGAACGCGATGCTATTTAGGTTGAACTATGACTCGGAGGTTATGGAAATCAAAGAGTGTTTGCAGACTATTGAATTTGGATGTAAAGAACTTAGAAGTCAAGGAGTTTTTTTGAAGCTTCTAGAAGCAGTGCTTAAGGCCGGGAATCGAATGAACGATGGAACTTCTCGAGGTAATGCTCAAGCTTTTAACTTAAATTCTCTAAGGAAACTCAATGATGTCAAAAGCAATAATGGAAAAACTACATTACTTCACTTTGTTGTTGAAGAAGTAGTCCTTTCAGAAGGAAAACGCGCGGTTCTTAACCGAAATAACAGCCTAAACCGAAATAACGCGACAAATGTTGTTTCCGAAGAAAGAAGAGAAAGGGAGTACAAAATGTTAGGATTATCAATTGTAGGAGGAATAAGTTCTGAATTTTCCAATGTTAGAAGAGCAGCAAATTTGGATTATAAAAGTTTATTTGGTTCAATTTCAGAACTATCTATTAAGCTTAATCAAATTAAAGAACTTGTGTCACAATGTGAGAATGGTGAAAGTGGAAATTTTGTGAAAGAAATGAATTATTTTATTGGAAATGCTGAGAAAGAATTGAAACTAGTGAGAGAGAAACAAACAATTGTGTTGCAGATTCTTAGTAAAACAACACAATATTATGAATCTTCAAAAGAGAAAGAAGAAAATGATCTTCAACTATTTGGTATAGTTAAGGATTTTTTGAGAATGGTTGATCATGTTTGCATTGAAATTGCTCGTGAAATGCAGAAAAAGAATCCTAAAGGAGTGTCTGGAACAAAGTAG 2250 0.3516 MAFNVILFLCLVFHIFLIQTCYCQNNSPQNIETLYPNETLASPPTNQPPKTQPSFSSPPPQGLIAVSKSSSSNGKIAKAVAATAASTIVICGLIFILAKRCIRKRKRSREIVNNIVVDGDRQQVIVPKGNVFEKIDGNVRGLIVDEDGLDVIYWRKLEEKNSNKDLYKDILNSPKNKEEIEDSHEEEENKVKKSKSIQEIPLLRGKSSSSHLNLYQEENDLYRVPRIQSQSSKNNVVQKQDFQSLPSKNDVVHKQDFESQSQPSILPSISAGAAAPPAPPPPIPARKSQAPPPPPPMKTSTSSSSSKAISQSNQRNSSGKGVEESNNDQVKLKPLHWDKVNTNAADHSMVWDKVDRGSFRVDQNLMEALFGYVATNRLSPKRNTESTSQSNDPSTKIFILDPRKSQNIAIVLKSLAVSRDEILDALIDGKGLNSDTLEKLTRVSPTEEEKSLILQYKEDPSRLAAAESFLYHILKAIPSAFNRLNAMLFRLNYDSEVMEIKECLQTIEFGCKELRSQGVFLKLLEAVLKAGNRMNDGTSRGNAQAFNLNSLRKLNDVKSNNGKTTLLHFVVEEVVLSEGKRAVLNRNNSLNRNNATNVVSEERREREYKMLGLSIVGGISSEFSNVRRAANLDYKSLFGSISELSIKLNQIKELVSQCENGESGNFVKEMNYFIGNAEKELKLVREKQTIVLQILSKTTQYYESSKEKEENDLQLFGIVKDFLRMVDHVCIEIAREMQKKNPKGVSGTK 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02121 749 Gene3D Formin, FH2 domain 342 744 IPR042201 -
Trre15g02121 749 MobiDBLite consensus disorder prediction 34 60 - -
Trre15g02121 749 MobiDBLite consensus disorder prediction 177 196 - -
Trre15g02121 749 MobiDBLite consensus disorder prediction 273 299 - -
Trre15g02121 749 MobiDBLite consensus disorder prediction 42 56 - -
Trre15g02121 749 ProSiteProfiles Formin homology-2 (FH2) domain profile. 322 749 IPR015425 -
Trre15g02121 749 SMART it6_source 322 741 IPR015425 -
Trre15g02121 749 SUPERFAMILY Formin homology 2 domain (FH2 domain) 277 739 - -
Trre15g02121 749 MobiDBLite consensus disorder prediction 300 325 - -
Trre15g02121 749 MobiDBLite consensus disorder prediction 230 334 - -
Trre15g02121 749 Pfam Formin Homology 2 Domain 325 727 IPR015425 -
Trre15g02121 749 Coils Coil 177 197 - -
Trre15g02121 749 MobiDBLite consensus disorder prediction 230 268 - -
Trre15g02121 749 PANTHER FORMIN-RELATED 16 736 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02121 Trre-Chr15 17249498 17251929 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02121 9 740 FH2 protein (formin) Gene Family AT1G70140 42.634 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02121 - - adu:107481275 733.021