Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02112 ATGTTGGAGTTGGAATGCCCCGGCGTGGTTTCTTGTTCTGACATACTTGCCACAGCGGCGCGTGATCTTGTTGTTATTGTCGGTGGTCCATTCTATGAGTTAGACCTTGGTCGAAAAGACAGTGTAGAGTCCAAAGCAACCGACGCAGAAAACAAATATCCATTACCAACAATGACAATATCTCAAGTGATAGACATTTTCACTTCAAAAGGATTTACCGTGCAAGAGATGGTGGCTCTAGTTGGTGCACACACAATAGGATTCTCCCACTGCAAACAATTTAGCAATAGGCTCTTCAACTTCAGCAAGACCACCGAAACCGATCCTACATACAACCCGCAATATGCCGCAGGGCTAAAGAATCTCTGCCAAAACTATCAAAAAGATCCTTCTATGTCAGCGTTCAACGACGTGATGACACCAACCAAGTTTGATAACATGTATTTTAGAAACTTGAAGAGAGGGTTAGGACTTTTGGCTACAGATAGTTTGATGTTCGAGGACAAGAGGACAAAACCATTTGTAGAACTGTATGCTACAAATCAAACTAAATTCTTTGAGGATTTTGGTCAAGCTATGCGAAAGGTTAGTGTTTTATATATTAAGGCTGGGAAGGAAGGAGAGGTACGAAATAGGTGTGATAATTTCAACCGGCTCAATACTAATTGA 669 0.4155 MLELECPGVVSCSDILATAARDLVVIVGGPFYELDLGRKDSVESKATDAENKYPLPTMTISQVIDIFTSKGFTVQEMVALVGAHTIGFSHCKQFSNRLFNFSKTTETDPTYNPQYAAGLKNLCQNYQKDPSMSAFNDVMTPTKFDNMYFRNLKRGLGLLATDSLMFEDKRTKPFVELYATNQTKFFEDFGQAMRKVSVLYIKAGKEGEVRNRCDNFNRLNTN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02112 222 PRINTS Plant peroxidase signature 28 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Plant peroxidase signature 151 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Plant peroxidase signature 191 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Plant peroxidase signature 9 19 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Plant peroxidase signature 75 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 SUPERFAMILY Heme-dependent peroxidases 3 217 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 ProSitePatterns Peroxidases proximal heme-ligand signature. 76 86 IPR019793 -
Trre15g02112 222 PRINTS Haem peroxidase superfamily signature 76 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Haem peroxidase superfamily signature 137 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Haem peroxidase superfamily signature 10 27 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PRINTS Haem peroxidase superfamily signature 28 40 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 CDD secretory_peroxidase 2 214 IPR033905 GO:0004601|GO:0042744
Trre15g02112 222 Gene3D - 2 217 - -
Trre15g02112 222 ProSiteProfiles Plant heme peroxidase family profile. 1 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 PANTHER - 2 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g02112 222 FunFam Peroxidase 54 196 - -
Trre15g02112 222 Gene3D Peroxidase, domain 2 54 196 - -
Trre15g02112 222 Pfam Peroxidase 3 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02112 Trre-Chr15 17175257 17176278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02112 2 221 Peroxidase AT5G47000 58.182 1.64e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02112 K00430 - gmx:100781063 334.339