Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02071 ATGAAGTTGGATAGGATTGAAGAGAGCAGTGTGAGGTTGTTAGGGAGTAGCAGTGTTGGAAGTAGTGAATCTAAGTGGGTTGATGGAAGTGAAGTTGATTGGGATGAAGATCCTCCTTGGTCTAATAAGGGCAATGGAAGTGATGGTAGAGAAGGGTATGGTTCAATTAGGAGGAGGCTTGTTAAGAAACCTAAAAGGGTTGACTCTTTTGATGTTGAAGCTATGGAGATTGCTGCTAGTCATGATCAACACTCCAAGGACCTTTCCCTCTGGCCTACCCTTGCATTAGCATTTCAGACTCTTGGTGTGGTATATGGTGACATGGGAACTAGTCCTCTATATGTTTTTGCTGATGTCTTCAGCAAGGTTCCGATTGGATCAGACGACGATGTCTTGGGGGCGTTATCGTTAATAATGTACACTATAGCGCTTATTCCATTAGCAAAATATGTTTTCATAGTTCTCAAAGCAAATGATAATGGAGAAGGAGGAACATTTGCACTATACTCACTGATTTGTAGGTATGCAAATGTGAATCTGCTTCCGAATCGCCAACAAGCTGATGAACAAATCTCTAGTTATAGGCTCAAACTTCCCACTCCAGAACTCGAAAGGGCTTTAAAAATAAAGGAAACTTTGGAAAGGACATCGTTTTTGAAAAACGTGTTGTTAGTGTTGGTTCTTATCGGAACTTCCATGATTATTGGAGACGGTATTCTAACTCCAGCAATATCAGTGATGTCTGCCATAAGTGGTCTACAAGGTCAAATAAATGGATTTGGAACAGGTGAAGTAGTTAGTATATCTATTGTAGTCCTGGTGGCTTTGTTCAGCATTCAACGATTTGGTACCGGTAAAGTGGGTTTCATGTTTGCCCCCGTACTTGCTTTATGGTTCTTTTCTCTAGGTTCTATTGGAATATATAATATACTCAAATACGATATTACCGTTGTAAGAGCACTCAACCCAGCATATATCTATTATTTCTTCAAGAATAATGGCAAAAGTGCATGGTCAGCTCTTGGTGGTTGTGTTCTTTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTTGGACATTTTTCTGTACCGGCAATACAGATTGCCTTCACCTGTGTGGTATTTCCATGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTCTGATGAAAAACCCCACTTCTTATTCGAGCGTTTTCTACAAATCTGTTCCAGAGAGTCTTTTCTGGCCAGTGTTTGTTATAGCCACACTTGGTGCTATGATTGCAAGCCAAGCAATGATATCTGCTACATTTTCGTGCGTCAAGCAATCGATGGCTTTGGGATGCTTCCCTAGGCTCAAGATAATTCATACTTCAAGAAAGTTCATGGGTCAAATTTACATTCCTGTTATTAATTGGTTTTTAATGATCATGTGCATAGTTGTCGTTTCCATCTTCCGAAGCACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTCGGTGTGATGATGGTTAGCACCACCTTGGTGACATTAGTAATGCTTTTAATTTGGCAAACAAACTTGTTCTTAGCATTTTGTTTCCTACTTGTATTTGGTTCTGTAGAGGTCATTTACATGTCTTCAGTCCTTTCGAAAATTTTCGAGGGCGGCTGGCTTCCACTTGCCTTCGCTTCCTTTTTCCTCTCTGTGATGTACACGTGGAACTACGGGAGTGTATTGAAGTACCGAAGGGAAGTCAGAGAAAAAATTTCAATGGACTTAATGCTTGATCTTGGTTCCAATCTCGGAACAGTAAGAGTTCCAGGTATAGGATTGCTATATAATGAACTTGTCCAAGGTGTTCCCTCCATTTTTCTCCAGTTCCTTCTAAGCCTTCCAGCTCTTCACTCTACCATAGTTTTCGTCTGTATTAAATATGTTCCGATTCCTGTTGTTCCTCAAGAAGAAAGATTTCTGTTCCGAAGGGTTTGTCCGAAAGATTACCATATGTTCCGCTGCGTAGCTAGGTATGGTTACAAAGATGTTCGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATCGAAAGTCTTGAGAAATTCTTGAGAATGGAAGCACTAGAAGCTGCATTGGAGTTGGAGGGTAACTTAACCGACAATTTGGACAGCATCTCGGTGGATACGAGAAATTCCGATCTTGCGACCGGTAATGGAATAGAAGAGCTTAGGATTCCACTAATGCACGGTCAGAATTTGGAAGGAATCGGAACTTCGACCTCTCATCAAGCTGCATCAACATTATTACCGTCTAGTTACATGCCGTCGGATGAAGATCCTAGTCTTGAATACGAGCTTGCGGCTCTTAGAGAAGCAACGGATTCAGGATTCACTTATTTACTAGGACATGGGGATGTGAGAGCAAAGAAGAACTCCTTTTTCTTTAAGAAATTGGTGATAAACTATTTCTATGCATTTCTAAGAAAGAATTGCAGAGGAGGTACTGCAAATATGAAAGTACCTCACACCAATATCATGCAAGTGGGGATGACATATATGGTCTGA 2529 0.4089 MKLDRIEESSVRLLGSSSVGSSESKWVDGSEVDWDEDPPWSNKGNGSDGREGYGSIRRRLVKKPKRVDSFDVEAMEIAASHDQHSKDLSLWPTLALAFQTLGVVYGDMGTSPLYVFADVFSKVPIGSDDDVLGALSLIMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEQISSYRLKLPTPELERALKIKETLERTSFLKNVLLVLVLIGTSMIIGDGILTPAISVMSAISGLQGQINGFGTGEVVSISIVVLVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGIYNILKYDITVVRALNPAYIYYFFKNNGKSAWSALGGCVLCITGAEAMFADLGHFSVPAIQIAFTCVVFPCLLLAYMGQAAFLMKNPTSYSSVFYKSVPESLFWPVFVIATLGAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLMIMCIVVVSIFRSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLAFCFLLVFGSVEVIYMSSVLSKIFEGGWLPLAFASFFLSVMYTWNYGSVLKYRREVREKISMDLMLDLGSNLGTVRVPGIGLLYNELVQGVPSIFLQFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRMEALEAALELEGNLTDNLDSISVDTRNSDLATGNGIEELRIPLMHGQNLEGIGTSTSHQAASTLLPSSYMPSDEDPSLEYELAALREATDSGFTYLLGHGDVRAKKNSFFFKKLVINYFYAFLRKNCRGGTANMKVPHTNIMQVGMTYMV 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02071 842 MobiDBLite consensus disorder prediction 1 53 - -
Trre15g02071 842 Pfam K+ potassium transporter 97 670 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre15g02071 842 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 85 840 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre15g02071 842 MobiDBLite consensus disorder prediction 11 25 - -
Trre15g02071 842 NCBIfam potassium uptake protein 96 842 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02071 Trre-Chr15 16835484 16842369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02071 3 842 Inorganic Solute Cotransporters AT1G60160 74.586 0.0 1259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02071 K03549 - gmx:100814419 1428.31