Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02025 ATGGTGTTACACAACAATCCTAGAACAACAACAAATGAAATTGTTGTAGAACAACATTGTCCATTGTTACATAGTACTAAAAAAGATGAGAAAATTGAAGTTGAAATTCAACAAAATGATGATGATAGATCCATTTGTAACAATAATGGGTCATCAGCATCATTTACTGGTTCTGTATTCAATTTATCAACAACAATTATTGGTGCTGGAATCATGGCTTTACCTGCAGCCATGAAAGTTTTGGGCTTAACCATTGGTATTGCTTCAATAATCTTCTTTGCTTTGCTTAGTCATACTTCTTTGGATATTCTCATGAGGTTTAGTAGAGTTGCTAAGGCTCAATCTTATGGTGATATTATGGGATGTGCTTTTGGAAGTGTTGGAAGATTGGTTTTTCAGATTTCTGTTCTTGTTAATAATTTTGGTATTCTTGTTGTCTACATCATCATAATTGGTGATGTATTGTCTGGAACAACTTCATCAGGAAGTCATCATTTCGGTGTACTTGAAGGATGGTTCGGCGAACACTGGTCGACTGGCCGGACTTTTGTTCTTCTTGTGACAACCCTTTTGGTATTTACTCCATTGGGATTTTTTAAGAGAATAGATTCATTAAGATATACTTCTGGTTTAGCAGTGGCTTTGGCAATTGTTTTTCTTGTCATTACTGCAGGAATCACTTTTGTTAAATTGTTCAATGGAAGTATAGAGAGTCCAAGATTGCTTCCTAATATTACTGATATCACATCTATTTGGAATCTATTCACAGCAGTTCCTGTTCTTGTCACAGCATTTGTTTGTCATTACAATGTGCATACAATAGACAATGAACTAGGAGACTCTTCACCAATACAACCAGTTATATGTGCATCATTGGTTCTATGTTCTGGCATATACATTCTTACAGCTTTATTTGGATTTCTACTATTCGGCGACGCAACTCTTGGTGATGTACTGGCCAACTTTGATACTGATCTTGGCATCCCTTATAGTAATGTGCTCAATGACATTGTTCGTATAAGCTACGCCCTTCACCTCATGCTTGTTTTCCCGGTTATCTTCTTTTCGCTCCGCTTCAATTTGGATGATCTTGTGTTTCCCTCAGCCAAGTCATTGGAATTTGATAAGTTCAGGTTTTCATTGATCACTACTGGACTCATTGTTTTGCTCTATGTGGCTGCAAATTTTGTACCTAGCATTTGGGATGTTTTTCAATTCACCGGAGCAACTGCTACCGTTTGCCTCGGTTTTATTTTCCCTGCTGCAATTGCTCTAAGGGATCCACAAAGCATTGCAACTAAGAAGGACAAAATTTTATCCATTGTGATGATTGTTCTTGCTGTTTTTGCAAATGTTGTGGCTATATACAGTAACGCTGATGCTTTGTTCAGAAAACACCAAAGCAAATCAAATTGA 1416 0.3686 MVLHNNPRTTTNEIVVEQHCPLLHSTKKDEKIEVEIQQNDDDRSICNNNGSSASFTGSVFNLSTTIIGAGIMALPAAMKVLGLTIGIASIIFFALLSHTSLDILMRFSRVAKAQSYGDIMGCAFGSVGRLVFQISVLVNNFGILVVYIIIIGDVLSGTTSSGSHHFGVLEGWFGEHWSTGRTFVLLVTTLLVFTPLGFFKRIDSLRYTSGLAVALAIVFLVITAGITFVKLFNGSIESPRLLPNITDITSIWNLFTAVPVLVTAFVCHYNVHTIDNELGDSSPIQPVICASLVLCSGIYILTALFGFLLFGDATLGDVLANFDTDLGIPYSNVLNDIVRISYALHLMLVFPVIFFSLRFNLDDLVFPSAKSLEFDKFRFSLITTGLIVLLYVAANFVPSIWDVFQFTGATATVCLGFIFPAAIALRDPQSIATKKDKILSIVMIVLAVFANVVAIYSNADALFRKHQSKSN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02025 471 PANTHER AMINO ACID TRANSPORTER 49 450 - -
Trre15g02025 471 Pfam Transmembrane amino acid transporter protein 53 455 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02025 Trre-Chr15 16386281 16388907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02025 7 470 Amino Acid or Auxin Permease AAAP Family AT3G30390 58.621 0.0 565