Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g02011 ATGGAAAAGATACTGGAGAGGTATGAAAGGTATTCCTATGCAGAGAGACAATTGGTTGCAAATGATTCCGAGTCACAGGGAAATTGGACAATTGAGTATACAAGACTGAAGGCTAAGATTGATCTTTTGCAAAGAAACTATAGGCACTACATGGGAGAAGATTTGGGATCAATGAGTCTGAAAGAGCTTCAGAGTCTTGAACAGCAGTTAGATACTGCTCTCAAACTCATTCGTACACGCAGAAACCAACTCATGTACGAGTCCATTTCAGAGCTTCAGAAAAAGGAGAAAGTGATTCAAGAACAGAATACCATGCTTGCAAAAAAGATCAAGGAGAAAGAAAAGATTGCAGCTCAGCAGCAGCAGGCACAATGGGAGAACCCAAATCATCATGGAGTCAATCCAAATTACTTACTACAGCAGCAACATCCAAGTTTGAACATGGGTGGCAATTACCGTGAGGATCAAGCACCAGAAATGGGGAGGAATGAGCTTGACCTGACCCTGGAACCATTGTATACCTGCCACCTTGGATGCTTTTGA 543 0.4236 MEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSMSLKELQSLEQQLDTALKLIRTRRNQLMYESISELQKKEKVIQEQNTMLAKKIKEKEKIAAQQQQAQWENPNHHGVNPNYLLQQQHPSLNMGGNYREDQAPEMGRNELDLTLEPLYTCHLGCF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g02011 180 Pfam K-box region 22 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre15g02011 180 Coils Coil 33 53 - -
Trre15g02011 180 Coils Coil 63 83 - -
Trre15g02011 180 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g02011 Trre-Chr15 16300415 16305228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g02011 1 180 MADS-box Gene Family AT1G69120 62.500 8.57e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g02011 K09264 - gmx:100810129 275.404