Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01987 ATGAGGGAAGCAACATTAATGATGAAGCGTCTATCATGGTTGCATCTTGATAAGCGAATAGACGAACCAGTACCTGGAGTTTATGTTGGTGATTTGTTTCTTTTTAGGATGGAATTGTGTATGGTTGGTTTGTATATGCAGAACCAAGCTAGCATTCATTATTTACCTAAGAGTAAGTCTTCCAATGGTGAGTCATGGAGGACAGGAAAAGAATTCCTCAAGGCAAATATGGGATCATAG 240 0.3875 MREATLMMKRLSWLHLDKRIDEPVPGVYVGDLFLFRMELCMVGLYMQNQASIHYLPKSKSSNGESWRTGKEFLKANMGS 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01987 79 ProSiteProfiles YDG domain profile. 22 79 IPR003105 -
Trre15g01987 79 SUPERFAMILY PUA domain-like 4 57 IPR015947 -
Trre15g01987 79 Gene3D - 4 76 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01987 Trre-Chr15 16077750 16077989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01987 15 68 Su(var)3-9 homologs AT1G73100 44.444 6.99e-10 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01987 K11420 - tpra:123924427 98.9821