Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01950 ATGACCAGCGTGCCAGAATTTCACTTAGGATATTTGGCTCCAGAATATGTAAGTACAGGTAAGGCTAGCAAAGATTCAGATGTTTATAGTTTTGGAGTTGTTGCTTTGGAGATCTCAACCGGAAGAAAAGCTGTTGAAGTTATGAGTGACCAAGATGGAGAGAAGGGATTGATTGAGTGGGTTTGGGATCATTATGGAAATGGAGAGTTATCTATGGCCATGGATGATTATTTGCAAAAAGATTTTGATGAGAAACAAGTAGAGTGTTTGATGATTTTTGGTCTTTGGTCTACTCATCCTGATGTAAATATAAGACCATCGATTAAACAAGTTATTCAAGTACTTAATTTTGAAGTTAGCCTTTCAAATCTTCCATCAAAGAGGCCTATTGCAACTTATCATACTACTCCAGTGTTTGTAAGTTCGGCCGGAGCTTCCATAACCATAAGCCTTCAAGACGGTCGTTAA 468 0.3803 MTSVPEFHLGYLAPEYVSTGKASKDSDVYSFGVVALEISTGRKAVEVMSDQDGEKGLIEWVWDHYGNGELSMAMDDYLQKDFDEKQVECLMIFGLWSTHPDVNIRPSIKQVIQVLNFEVSLSNLPSKRPIATYHTTPVFVSSAGASITISLQDGR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01950 155 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 129 - -
Trre15g01950 155 Pfam Protein tyrosine and serine/threonine kinase 9 52 IPR001245 GO:0004672|GO:0006468
Trre15g01950 155 Gene3D Transferase(Phosphotransferase) domain 1 2 137 - -
Trre15g01950 155 SUPERFAMILY Protein kinase-like (PK-like) 9 123 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01950 Trre-Chr15 15720757 15721224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01950 9 155 Receptor kinase-like Gene Family AT5G10530 57.516 1.92e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre15g01950 PK_Tyr_Ser-Thr 1.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01950 - - mnt:21391163 191.43