Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01947 ATGGATCACGAACTTGGGCCGCAAACAACTGGGCTAGCCGGAACATTGGGCTATCTAGCTCCAGAATATGTGAGCACAAGAAGGGCCAGTAAAGAATCAGATGTGTATAGTTTTGGGATAGTTGTCATGGAGATAACTACGGGAAAGAAAGCGACTGCAATTTTGAAGGAAAAATATGAAGAGAAAGGAATGATTGAGTGGGTTTGGGATCATTATGGAAGAGGAGAGTTACTTAAGGCTATGGATGAGAATCTGAAAAAGGATTATGATGAGAAACAAGTAGAGTGTTTGATGATTGTTGGATTATGGTGTGCTCATCCTGATGTAAATCTTAGACCATCTATTAGACAAGCGATTCAAGTGCTTAATTTTGAAGTTTCTTTGCCAAATCTTCCACCCAACAGACCTTTTGTAACCTATCATGCTCATCCACCGTTTGTAATATCTATAGAGGCTTTCATTTTGTCCCATCTTTTATACCAAAATGAAAGAAAAAAAAAACTAAGACAATTAAAATTTCGAATTTAA 528 0.3731 MDHELGPQTTGLAGTLGYLAPEYVSTRRASKESDVYSFGIVVMEITTGKKATAILKEKYEEKGMIEWVWDHYGRGELLKAMDENLKKDYDEKQVECLMIVGLWCAHPDVNLRPSIRQAIQVLNFEVSLPNLPPNRPFVTYHAHPPFVISIEAFILSHLLYQNERKKKLRQLKFRI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01947 175 FunFam Lectin-domain containing receptor kinase A4.3 1 142 - -
Trre15g01947 175 SUPERFAMILY Protein kinase-like (PK-like) 7 149 IPR011009 -
Trre15g01947 175 Pfam Protein kinase domain 9 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01947 175 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
Trre15g01947 175 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 133 - -
Trre15g01947 175 ProSiteProfiles Protein kinase domain profile. 1 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01947 Trre-Chr15 15706276 15706875 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01947 1 141 Receptor kinase-like Gene Family AT5G10530 64.336 4.96e-61 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre15g01947 Pkinase 3.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01947 - - csav:115712462 218.779