Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01911 ATGGCCAACCTTTCTGATGTGATAGAATTGGGTAAAAGTAGTGAAGAGAGGAGAGAAGAACAAGAACTAGAAGATGAAGAAAGTTTCTCATATGCTATACACCTTGCCAACTCTATTGTGCTACCAATGACACTTCAATCTGCAGCTGAGCTTGGTGTTTTCGATGTGTTGCAAAAAGCCGGTAAAGGAGCTCAATTGTCGGCCGAAGAGATTGCGGCCCGTCTTTCATGTAACAATCCGGATGCTCCCAAAATGTTAGATCGCATTCTTGCTCTTCTTGCCTCACATGATATATTGAAGTGTTTGGTTTTTCAAGATCAAGAAAAACTTGGATCCTTTCATAGACTTTATAGTATGGCTCCCGTTGCTAAATTCTTTGCTCCTAATTCTGATGGTGTTTCATTGGGACCATTGTTCTCTTTGATTCAAGATAAGGTTTTCTTAGCTAGCTGGTCCGAGCTTAATAATGCAATACGAGAAGGGGGTGTTCCATTCGACAGGGTTCATGGCACACATGCCTTTGAATATCCAAGCTTGGACTCGAGGTTCAACCAAGTTTTCAATAAAGCTATGATCAATCATTCCAAATTAGTTATGAAGAAAGTTCTTGAGTCTTATAAAGGTTTCAAGGACATAAAAAGACTTGTGGATGTTGGAGGTGGTCTTGGGGTCAACATTAACTTGATCACAACTAAATATCCTCAAATAGAGGGTATCAATTTCGACTTACCTCATGTCATTCAACATGCCCCTTCATATCCTGGAGTTGAACACGTTGGTGGAGATATGTTTGAAAGTGTGCCTAAAGGAGATGCTATCTTTATGAAGTGGATACTCCATGATTGGAGTGATGAACACTGCTTAAAGCTTTTGAAGAATTGTTATGATGCTATCCCAAATGATGGGAAGGTGATTGTTTTAGAGGCACATATTCCTATTGTGCCTGAAAATGGTGATGCTGCAAAGTCTACTTCCCAATTGGATGTTCTGATGATGACTCAAAACCCAGGAGGAAAAGAGCGAACTAAGCAAGAATTTATTGATTTTGCAACTAGAGTTGGATTTAGTGGCATCAGATTTGAATGTTTTGTCCGTAACTTTTGGGTCATGGAGTTCTTTAAGTAA 1125 0.3956 MANLSDVIELGKSSEERREEQELEDEESFSYAIHLANSIVLPMTLQSAAELGVFDVLQKAGKGAQLSAEEIAARLSCNNPDAPKMLDRILALLASHDILKCLVFQDQEKLGSFHRLYSMAPVAKFFAPNSDGVSLGPLFSLIQDKVFLASWSELNNAIREGGVPFDRVHGTHAFEYPSLDSRFNQVFNKAMINHSKLVMKKVLESYKGFKDIKRLVDVGGGLGVNINLITTKYPQIEGINFDLPHVIQHAPSYPGVEHVGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYDAIPNDGKVIVLEAHIPIVPENGDAAKSTSQLDVLMMTQNPGGKERTKQEFIDFATRVGFSGIRFECFVRNFWVMEFFK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01911 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 374 IPR016461 GO:0008168
Trre15g01911 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 372 IPR029063 -
Trre15g01911 374 PIRSF O-mtase 10 374 IPR016461 GO:0008168
Trre15g01911 374 PANTHER O-METHYLTRANSFERASE 35 355 IPR016461 GO:0008168
Trre15g01911 374 FunFam Caffeic acid 3-O-methyltransferase 11 126 - -
Trre15g01911 374 Pfam Dimerisation domain 43 94 IPR012967 GO:0046983
Trre15g01911 374 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
Trre15g01911 374 SUPERFAMILY "Winged helix" DNA-binding domain 24 129 IPR036390 -
Trre15g01911 374 Gene3D Vaccinia Virus protein VP39 128 374 IPR029063 -
Trre15g01911 374 MobiDBLite consensus disorder prediction 1 25 - -
Trre15g01911 374 Gene3D - 10 126 IPR036388 -
Trre15g01911 374 FunFam Caffeic acid O-methyltransferase 127 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01911 Trre-Chr15 15465804 15470514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01911 10 374 Monolignol Biosynthesis Gene Families AT5G54160 49.319 6.55e-135 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01911 K13066 - gmx:100803633 554.288