Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01900 ATGGCTGAGCAACGAAACCGTTGGAGCTGGGACGTTACAGGTTTCGAACCATGGAAGTCATCCTCGCCGCAGAAACCGCCTTCGCCGTCAGAGCAAGACGATCGGAAACCTAATGCGCCGTTAGTAAGGAGATACTCTATTTCGACTTCATCGGTTCTTCCGCAGCATAAAATCACTACAGCTTCTAAGCTTCAACGGTTAAAGGATAAAGTTAAGCTTGCCAAAGATGACTATTTGCAGTTAAGACAAGAAGCAAGTGAGCTTCAAGAATATTCAAATGCAAAACTTGATAGAGTTACACGATATCTTGGTGTTCTTGCTGAGAAAACCCGCAAGTTAGATCAAGTTGCCCTTGAAACTGAAGCAAGAATATCACCACTGATCAATGAGAAAAAGAGATTGTTCAATGATTTATTGACATCTAAAGGAAGCATACGCATATTCTGTCGGACAAGGCCGTTATTTGAAGATGAAGGTGCTTCAGTTGTTGATTTTCCAGATGATCACACCATTCGTGTAAATACTGGTGATGAAACCTTCGCTAACCCCAAAAAAGATTATGAATTTGATAAAGTTTATGGTCCTCATGTTGGACAAGCTGAGTTATTCAGTGATGTTCAACCACTGGTGCAGTCAGCTTTGGATGGATATAATGTTTCCATATTTGCCTATGGTCAAACCCATTCCGGAAAAACACACACTATGGAAGGGTCGAGCTATGATCGGGGTTTATATGCTCGGTGTTTTGAGGAGTTGTTTGATTTAGCCAATTTGGATACAACCTCCACTTCTCAATATAAATTTTGTGTTACAGTTTGTGAACTTTATAATGAACAGACTAGGGATCTACTTTTGGAGTCAGGGAAAAACATGCCAAAACTCTGCTTTGGATCGGCTGAATGTTCTGTAGAACTGGTGCAGGAAAAAGTCAATAACCCTTTGGAATTCTCTACAATTTTAAAAACTGCTTTCCAGAATCGGGGAAATGATTTATTAAAGATCAACGTATCTCATTTGATTGTCACAATACACATATTTTATAACAATTCGATCACTGGTGAGAACTCATATAGCAAACTTTATCTGGTTGACTTGGCTGGAAGTGAAGGTTCAATAACAGAAGACGATAGTGGTGAGCGTGTCACAGATTTGCTGCATGTTATGAAGTCACTTTCGGCGTTGGGAGATGTTTTGTTTTCTTTAACATCGAAGAAGGATATTGTTCCTTATGAAAATTCAATGTTAACAAAACTTCTAGCAGATTCGCTTGGTGGGAGTTCAAAAACTCTGACGATTGTGAATGTCTGTCCAAGTGTTTCAAATTTATCAGAAACATTGATGTCTCTCAATTTCTCTGCTAGAGCTCGAAATTCTGTCTTAAGTCTTGGAAACCGAGATACAATAAAGAAATGGAAAGATGTTGCCAACGATGCCCGTAAGGAGTTGCATGAGAAGGAAAAAGAAATTCAAGATCTAAAGCAAGAGGGTTTGGGACTCAAGAAAGCGCTTAAAGATGCTAATGATCAGTGTGTTCTACTCTTCAATGAAGTGCAAAAGGCATGGAAAGTTTCCTCTGCATTGCAGACCGATTTAAAGTCAGAGCATATTTTGCTTTCAGATAAGTATAAGATTGAGAAAGAAGAAAGTACTCAGCTTAGAAATCAAGTTTCTCAGCTATTACAGTTAGAACAAGATCAAAAATTGCAGATACAACAGCAAGATTCAACCATCCAAAGTTTGCAGGTTAAAATCAGAAGCCTTGAAACTGAGCTCAGCGAAGCACTTGGATCCAGCAAAAGTAGTTCAACGTTTGTTTCAGAGCCAGAGTCTGCAGCTCTATCTGATTCCAGAACAACTGGAGATGGCACTGTGGTAACCAAAAAATTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATGAGAAATTGTTTGATAGATTGACCGAGAAGAAAGCATCTGTGGCTGGGTCACCTATGTTGGCACCTTCTTTTCAGCCATCAAGTCCATTATCTCGTGAATCAGTAAATATACAGCCTCAGAATACGTCAAGGAATGGTACTAGCAACAACAAAGTAGCAAATTCTACTCATGCTCCTTCTTCACCTTTGACTGCTGCTGCTAAGAATGATGGAACAGTTGCTTTGGTTAAATCTGGCTCTGAAATAGTCAAGACTACCCCTGCGGGTGACTATCTTACTACTGCCCTGAATGACTTTGACCCAGATCAATATGAAGGTCATGCTGCCATTTCTGACGGTGCAAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATAAAAGCTGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATCAGGGACGCTGTTTTCTCTTTTATTAGGAAAATGGAACCAAAGCGAGTAATGGACACCATGCTTGTTTCACGTGTTAGAATTCTGTATATAAGATCTTTACTTGCAAGGTCCCCAGAATTGCAATCAATTAAGGTCTTGCCCGTCGAGTGCTTTCTTGAGAAGGCTAATGCAGGCCGCAGTAGAAGTTCCAGCCGGGGGAATAGTCCCGGAAGGTCTCCTGTACAATATGTTGATGAGCAGATCCAGGGATTTAAAGTGAATTTAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTGTTGAAGATTCGTGGGATTGATCAGGAAATCTGGAGACAGCAGGTGACTGGTGGGAAGCTTAGAGAAATTACCGAGGAAGCTAAAAGTTTTGCAATAGGTAACAAGGCTCTTGCTGCACTCTTTGTACATACTCCGGCAGGTGAGCTGCAGCGCCAAATTAGATCGTGGCTTGCAGAGAGCTTTGACTTTCTATCTGTTTCTGGAAATGATGCATCTGGGGGGTCAACTGGTCAGTTGGAACTTCTTTCAACAGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCTGCTCTTCCTCCACACACTGATGCCCTTGGCCAGCTATTATTTGAATATTCAAAACGTGTATATACTTCTCAGCTACAGCACTTAAAGGATATTGCTGGTACCTTGGCAACAGAAGAGGCTGAAGATGCAGCACAAGTATCCAAGTTGCGTTCAGCTCTAGAATCTGTTGATCATAAAAGAAGGAAGATTCTGCAACAAATGAGAAGTGATGTAGCTTTATTGACATTGGAAAATGGGGGATCGCCTATCTCAAATCCTTCTACTGCAGCTGAAGATGCACGATTAGCATCTCTCATTTCACTCGATGGAATATTAAAGCAGATCAAGGATATAACAAGGCAATCTTCTGTGAACATCTTAAGAAAAAGTAAGAAAAGAGCATTGCTTGAATCTCTTGATGAACTAAAAGAACAGATGCCTTCACTTCTTGAAATTGATCATCCATGTGCTCAGAGCCAAATTTCCGATGCTTGCAGCATGGTTGAGTCAATTCCTGAAGAAGATGACCACATTCAAGATCTATCTCATGGTCGCAAGCCATCAACAGATCTAGGCACCGGATCTGAAATTGACGTTGCACAGTGGAATGTACTCCAATTTAACACAGGCACTGCCACACCTTTTATAATAAAATGTGGAGCAAACTCAAATTCAGAACTAGTCATTAAAGCTGAAGCTAGAGTTCAAGAACCTAAAGGTGGTGAAATTGTAAGGGTTGCCCCGAGGCCCTCTATTTTGGAAAACGTGAGCTTGGATGAAATGAAACAAATATTTTCTGAACTACCTGAGGCTCTAAGCTTGCTTGCCCTAGCAAGGACTGCAGATGGCACTCGAGCACGGTATTCTAGATTATATAGAACCTTGGCTTCTAAGGTTCCATCACTTAGAGATTTGGTCAATGAACTCGAAAAAGGGGGTGCACTAAAAGATGCGAGAACATGA 3891 0.4097 MAEQRNRWSWDVTGFEPWKSSSPQKPPSPSEQDDRKPNAPLVRRYSISTSSVLPQHKITTASKLQRLKDKVKLAKDDYLQLRQEASELQEYSNAKLDRVTRYLGVLAEKTRKLDQVALETEARISPLINEKKRLFNDLLTSKGSIRIFCRTRPLFEDEGASVVDFPDDHTIRVNTGDETFANPKKDYEFDKVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCFEELFDLANLDTTSTSQYKFCVTVCELYNEQTRDLLLESGKNMPKLCFGSAECSVELVQEKVNNPLEFSTILKTAFQNRGNDLLKINVSHLIVTIHIFYNNSITGENSYSKLYLVDLAGSEGSITEDDSGERVTDLLHVMKSLSALGDVLFSLTSKKDIVPYENSMLTKLLADSLGGSSKTLTIVNVCPSVSNLSETLMSLNFSARARNSVLSLGNRDTIKKWKDVANDARKELHEKEKEIQDLKQEGLGLKKALKDANDQCVLLFNEVQKAWKVSSALQTDLKSEHILLSDKYKIEKEESTQLRNQVSQLLQLEQDQKLQIQQQDSTIQSLQVKIRSLETELSEALGSSKSSSTFVSEPESAALSDSRTTGDGTVVTKKLEEELKKRDALIERLHEENEKLFDRLTEKKASVAGSPMLAPSFQPSSPLSRESVNIQPQNTSRNGTSNNKVANSTHAPSSPLTAAAKNDGTVALVKSGSEIVKTTPAGDYLTTALNDFDPDQYEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKMEPKRVMDTMLVSRVRILYIRSLLARSPELQSIKVLPVECFLEKANAGRSRSSSRGNSPGRSPVQYVDEQIQGFKVNLKPEKKSKFSSVVLKIRGIDQEIWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAESFDFLSVSGNDASGGSTGQLELLSTAIMDGWMAGLGAALPPHTDALGQLLFEYSKRVYTSQLQHLKDIAGTLATEEAEDAAQVSKLRSALESVDHKRRKILQQMRSDVALLTLENGGSPISNPSTAAEDARLASLISLDGILKQIKDITRQSSVNILRKSKKRALLESLDELKEQMPSLLEIDHPCAQSQISDACSMVESIPEEDDHIQDLSHGRKPSTDLGTGSEIDVAQWNVLQFNTGTATPFIIKCGANSNSELVIKAEARVQEPKGGEIVRVAPRPSILENVSLDEMKQIFSELPEALSLLALARTADGTRARYSRLYRTLASKVPSLRDLVNELEKGGALKDART 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01900 1296 ProSiteProfiles Kinesin motor domain profile. 144 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g01900 1296 Coils Coil 64 91 - -
Trre15g01900 1296 ProSitePatterns Kinesin motor domain signature. 358 369 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre15g01900 1296 MobiDBLite consensus disorder prediction 597 624 - -
Trre15g01900 1296 MobiDBLite consensus disorder prediction 1 39 - -
Trre15g01900 1296 Coils Coil 468 509 - -
Trre15g01900 1296 FunFam kinesin-like protein KIN-14B isoform X1 91 459 - -
Trre15g01900 1296 Pfam Kinesin motor domain 150 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g01900 1296 PRINTS Kinesin heavy chain signature 216 237 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g01900 1296 PRINTS Kinesin heavy chain signature 408 429 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g01900 1296 PRINTS Kinesin heavy chain signature 359 377 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g01900 1296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 457 IPR027417 -
Trre15g01900 1296 SMART kinesin_4 142 466 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g01900 1296 PANTHER KINESIN-LIKE PROTEIN KLP-3 55 665 IPR027640 GO:0003777|GO:0007018
Trre15g01900 1296 MobiDBLite consensus disorder prediction 597 623 - -
Trre15g01900 1296 Coils Coil 626 660 - -
Trre15g01900 1296 Coils Coil 570 597 - -
Trre15g01900 1296 Gene3D Kinesin motor domain 88 458 IPR036961 -
Trre15g01900 1296 MobiDBLite consensus disorder prediction 667 712 - -
Trre15g01900 1296 MobiDBLite consensus disorder prediction 661 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01900 Trre-Chr15 15369594 15388600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01900 131 459 Calmodulin-binding Proteins AT5G65930 36.657 1.41e-48 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01900 - - mtr:25502890 2268.04