Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01848 ATGACAGCATTTTCAATATTAATATTTGGTCAAGATTTACCAGATGGAAATTTTCATGGTTTAAAAAAATCAGGTGAAAAAGCCAAAGATGAATTTTCAAAAGTACTTTATCATGGTGTGTTAAATTATAGAGGTTGGATTTTAGCATTGACTTATGGTTATTGTTTTGGTGTGGAGTTAACTGTTGACAATATTATAGCTGAATATTTTTATGACAAGTTTAACCTTAAACTTCATACTGCTGGAATTATTGCTGCAAGTTTTGGTTTGGCTAATGCATTTTCTAGACCTGGTGGAGGTTTAATTTCTGATTTAATGGCTAAGAGATTTGGAATGAGGGGTAGATTATGGTGTTTGTGGATTTGTCAAACTTTGGCTGGTGTTTTTTGTGTTATTTTGGGACTAGTTGGAAGTTTAAGTGTTTCTATTGTTGTTATGATTATATTCTCTGTTTTTGTTCAAGCTGCTTGTGGAATGACTTTTGGGATTGTTCCTTTTGTCTCAAGAAGGTCCTTAGGAGTTATATCAGGAATGACAGGAGGAGGAGGAAACGTTGGAGCAGTTATAACTCAACTAATATTCTTCAAAGGATCAAGATTTTCAAAAGAAAGAGGAATAACACTAATGGGTGCCATGATCATAATATGCACATTACCATTATTCTTAATCTATTTTCCACAATGGGGTGGCATGTTACTTGGTCCATCATCATCTAAAAATGTCTCAGAAGAAGATTATTACTTGTCTGAATGGAACTCAAAGGAAAGAGAAAAAGGGTCTCATCATGGTAGCTTGAAATTTGCTGATAATAGTAGAAGTGAAAGAGGTAGAAAATTGAATATTTCAACTAGACCTTCTGAGGATACCACACCACCACCACAAAATGTTTGA 891 0.3389 MTAFSILIFGQDLPDGNFHGLKKSGEKAKDEFSKVLYHGVLNYRGWILALTYGYCFGVELTVDNIIAEYFYDKFNLKLHTAGIIAASFGLANAFSRPGGGLISDLMAKRFGMRGRLWCLWICQTLAGVFCVILGLVGSLSVSIVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVITQLIFFKGSRFSKERGITLMGAMIIICTLPLFLIYFPQWGGMLLGPSSSKNVSEEDYYLSEWNSKEREKGSHHGSLKFADNSRSERGRKLNISTRPSEDTTPPPQNV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01848 296 Gene3D MFS general substrate transporter like domains 27 229 IPR036259 -
Trre15g01848 296 MobiDBLite consensus disorder prediction 254 296 - -
Trre15g01848 296 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 2 278 IPR044772 GO:0015112
Trre15g01848 296 MobiDBLite consensus disorder prediction 254 282 - -
Trre15g01848 296 FunFam Nitrate transporter 2.1 29 230 - -
Trre15g01848 296 SUPERFAMILY MFS general substrate transporter 27 224 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01848 Trre-Chr15 14957528 14959860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01848 1 285 Inorganic Solute Cotransporters AT1G12940 68.772 1.93e-146 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01848 K02575 - gmx:100787888 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01848 15 14957528 14959860 Trre15g01848 15 14957528 14959860 ECH