Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01841 ATGGGATGTGACATTGGTGTTTATCATTTACGCGGCTTAGGTTACTACTTGCGAGTGGTAGTAACCCAAGCTAGAGGCGTAGTGTATGCATCATCATTTGGCCCTCTCAGCATGATATTTGTTGCATTTTTGGACATCTTCCTTCTTGGTGAGCAGTTATTGCTTGGAAGGTTGATAGGTGCAATTGTCATTTGTCTGGGTCTCTGCTATGCCATGTGGTCGCAAACCACTGTGGGATCATAA 243 0.4444 MGCDIGVYHLRGLGYYLRVVVTQARGVVYASSFGPLSMIFVAFLDIFLLGEQLLLGRLIGAIVICLGLCYAMWSQTTVGS 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01841 80 Pfam EamA-like transporter family 13 71 IPR000620 GO:0016020
Trre15g01841 80 SUPERFAMILY Multidrug resistance efflux transporter EmrE 11 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01841 Trre-Chr15 14887046 14888764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01841 12 76 Nodulin-like Gene Family AT2G39510 46.154 4.07e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01841 - - lja:Lj0g3v0273039.1 69.707