Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01798 ATGAGTAACAGTGACGTCGACAAAACCGTAAAAGAAAAGGAGCCTAAGACGCCTCCAGCAGCTACATCACAGGAGCAGTCTTCAACGACAACTGGCACTCCGGCAGTTAATCCTGAATGGGCTAACTATCAGGCATATTCTCCTATACCTCCACCTGGATACATGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATGATGCCTCCTTATGGCACCCCACCACATCCTTATGTCACAATGTATCCCCATGGTGGCATATATGCACATCCATCCATGCCTGCGGGATCTTATCCTTTTAGTCCTTATGCTATGCCTTCTCCAAATGGTATGGTGGATGCTTCAGGGAATACTCCAGGCAGCAGTGAAGCAGACGGTAAACCTCACGAGGTGAAGGAAAAATTACCAATCAAAAGATCTAAAGGAAGTATGGGTAGTATGAATATGGTTACAGGAAAAAATAATGAACTCGGCAAAACGCCAGGGGCATCTGCCAATGGAATTCATACTAAAAGTGCTGAGAGTGCAAGTGAAGGTACCAGTGAAGGAAGCAATGAAAATTCCCATAATGACTCTCAATTGAAATCCGGGGAGAGGCAGGACTCTTTTGAAGATCATGAACCTTCTCAAAATGGCAATTCGGCACATGCTCCTCAAAATGGGGCACTTAATACGCCACCTACAGTTAACCAGACTATGTCTGTCGTACCTATGTCTGTTGCTGGTCCTCTCACAACAGTTCCTGGTCCCACTACTAACTTAAATATAGGAATGGAGTATTGGGGAACACCAACTTCATCCACCATTCCTGCAATGCATGGAAAGGATGAAAGAGAGCTTAAAAGACAAAGGCGGAAACAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAGCAGGCTGAATGTGATGAACTAGCTCAGCGTGCTGAGGTTTTGAATGTAGAAAATGCCTCTCTCCGTGCTGAACTGAGCCGGATCAAGAGTGAGTACGAGAAGGCACTTTCTGAGAATGCAGCTCTCAAGGAGAGACTTGGGGAGATACCAAGGAACGAGGATCTCAAACCTGCCCAGAATGATCAGCATGCGGGTGAAGTCACTCAACAGAGTGGTTAG 1131 0.4642 MSNSDVDKTVKEKEPKTPPAATSQEQSSTTTGTPAVNPEWANYQAYSPIPPPGYMASSPQAHPYMWGVQHMMPPYGTPPHPYVTMYPHGGIYAHPSMPAGSYPFSPYAMPSPNGMVDASGNTPGSSEADGKPHEVKEKLPIKRSKGSMGSMNMVTGKNNELGKTPGASANGIHTKSAESASEGTSEGSNENSHNDSQLKSGERQDSFEDHEPSQNGNSAHAPQNGALNTPPTVNQTMSVVPMSVAGPLTTVPGPTTNLNIGMEYWGTPTSSTIPAMHGKDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNVENASLRAELSRIKSEYEKALSENAALKERLGEIPRNEDLKPAQNDQHAGEVTQQSG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01798 376 MobiDBLite consensus disorder prediction 268 305 - -
Trre15g01798 376 Gene3D - 284 353 - -
Trre15g01798 376 MobiDBLite consensus disorder prediction 1 15 - -
Trre15g01798 376 Pfam G-box binding protein MFMR 1 98 IPR012900 -
Trre15g01798 376 Coils Coil 308 349 - -
Trre15g01798 376 MobiDBLite consensus disorder prediction 148 195 - -
Trre15g01798 376 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 368 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trre15g01798 376 MobiDBLite consensus disorder prediction 129 143 - -
Trre15g01798 376 MobiDBLite consensus disorder prediction 211 234 - -
Trre15g01798 376 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Trre15g01798 376 MobiDBLite consensus disorder prediction 196 210 - -
Trre15g01798 376 MobiDBLite consensus disorder prediction 19 38 - -
Trre15g01798 376 MobiDBLite consensus disorder prediction 115 234 - -
Trre15g01798 376 MobiDBLite consensus disorder prediction 1 38 - -
Trre15g01798 376 Pfam Disordered region downstream of MFMR 137 274 - -
Trre15g01798 376 MobiDBLite consensus disorder prediction 276 290 - -
Trre15g01798 376 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Trre15g01798 376 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Trre15g01798 376 MobiDBLite consensus disorder prediction 347 364 - -
Trre15g01798 376 CDD bZIP_plant_GBF1 286 336 IPR045314 GO:0003700|GO:0006355
Trre15g01798 376 SUPERFAMILY Leucine zipper domain 284 338 IPR046347 GO:0003700|GO:0006355
Trre15g01798 376 MobiDBLite consensus disorder prediction 347 376 - -
Trre15g01798 376 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01798 Trre-Chr15 14435810 14440863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01798 1 376 bZIP Transcription Factor Family AT2G35530 58.477 3.91e-153 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre15g01798 MFMR_assoc 1.3e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01798 K09060 - gmx:778122 541.191