Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01789 ATGGATGAGGTTAGAGTTGGTGTTAGTAGTTGTAGTAGTGAAGCAGTGCAGGCTCAGTCAAGAGATACAGTTGAGGAGACGGCGGCTTCTTCGTCTTCGGGATGGAGTCCTAGGGAGCTTGCATTTGCTGCTTTTGTGCCGCGGGATAAAGAAGAACAACAAGAAGATGAACGTGTTAATGCTGCTGGGAAGTTCTTGAAGTACCGTGCATTTGTTAGGAGACCTTTGGTGGGACGATTGACCAAGGAAATAGTTGAAACATACCGAATATGCAATCCACAGTTTAAATATTCCGAAGATCTAAATCCAAAGAGATTTTTGACCAGTCCATCTATTGGAGTGCTTAATGATGGCTATGATAATGCAAACTCGGATCTTATTCTGACAGTGAATTTGGTCTTGATCCATGTAGAGAAAAGTAGAAGATATACTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTAGCCAAATGCTGGGATTCAGAAACCAACAGTTTTGTTGCTGTCAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCACTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTACGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATATCAAAGACATTTGTGCATATGCTTTGAACTGTTGGACACAAATTTGTATGAGCTTATCAAAATGAATCATTTTAGGGGATTGTCAATTGGTATTGTTCAGCTGTTCTCTAAGCAGATTTTATGTGGACTGGCTCTGTTAAAAGATGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCTCTGTGAAGCAGGCAGAAATAAAGATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTATTCCTATATTCAGAGTCGATACTATAGATCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCAGAGTTTGATCTTTTGAGAAGGATGATTGAAATAATTGGAGGACAACCACCTGATTATGTACTACGGGACGCCAAAAACACTAGTAAATTCTTTAAGTGTATAGGGAGTCTCCAAAACATAGAAATAAGTGAGGGTTCCAAAAATGGACGAGTTTATCAAGCATTGACAGAGGAAGAATATGAAGCTGAGCGTTACAGCCATGATCTGGAGATGTCACCGATTCAATCTGGTCCGGTTTCTAAAACATCGGCCTTAAATTCAAACAACTTTACTGGAAAAATACCTCCTTCATTGGGAAAACTCTCCAAGCTTTATTGGTTGGACTTGGCAGAAAATCAGCTTACAGGACCTATCCCAGTTTCAACTTCCACTACCCCTGGCTTAGACCTTCTTTTAAAGGCTAAGCACTTCCATTTCAGTAAGAATCAGCTTTCTGATTCCATTCCTCCAAAACTTTTCAACTCTGACATGAAACTCATACACATATTATTTGATAACAATGATTTAAGTGGAAGTATACCTTCAACAATAGGACTAGTTCAGACAGTTGAGGTTCTTCGGCTCGATCGAAATTTCTTGACAGGAGAAGTTCCTTCAAATCTCAACAACCTTAGTAACATCAATGAATTGAATTTAGCACACAACAATTTGTCAGGTCCTTTGCCAGACTTAACTTCAATGGATACCCTCAACTATGTGGATCTTAGTAAGAACAATTTTGATCCATCAGAAGCTCCAAGTTGGTTAACAACTATACCAACACTTACCACACTTATAATGGAGAATGGATCTCTTGAAGGACCTCTTCCACCAAAACTCTTCAGCCTTCCTCAAATACAGCAAGTGAAACTAAGAAGCAATACATTGAACAATACACTAGACATGGGCGACAACATTTGTCCGCAACTGCAGCTTGTGGATTTACAAGACAATAAGATTTCAACATTCACAGTCGGTTCACAATACAAAAATACATTGATTCTCATAGGAAACCCAGTTTGCAATATTGCTCTCTCTAATACAAATTACTGCAACCTTCAGCAAAAGCCTAAACCGTATTCAACTAGCTTGGTGAAGTGTGGAGCAATAACATGTCCCTCTAAACAAAAACTCAGTCCACAAAGTTGTGAATGTGTTTATCCATATCAAGGAACTTTCCTTTTTAGAGCACCTTTGTTTAGAGAATTGTCTAATATAAGTACTTTTCATTCACTTGAAATGAGCCTTTTTAGTTTCTTTACAAAATTAGCCTTAACACCTGGAGCAGTTTTTTTACAAAATACTTCTTTCAATGATGATGATTATCTTGAAATGCAACTAGCACTCTTTCCACCAACAGGACTATATTTTAAAAGGTCAGAAGTTCAAAGGATCGGATTTTCATTGAGTCATCAAACTTACAAGCCTCCACATGAATTTGGACCTTATTACTTCAAGGCATTTGATTATGCTTTTCCAGATTTGCGCAAAGGAACTACTTTTAGCAGAGGTATTATTATTGCGATAGCAGCTGGGAGCGTATTTCTGGTCTTGTGCCTCATAGGGTCAGTTGTATACGCAATCCTGCAAAAGAAGCGCGCAGAGAAAGCCATCGGAATAAGTAGACCATTTGCATCATGGGCACCAAGTGGTAAGGATAGTGGAGGTGCACCACAATTGAAGGGAGCAAGATGGTTCTCTTATGATGAACTCAAAAAATGCACCAATAATTTCTCTGGAAGCAATGAACTAGGCTCTGGTGGCTATGGCAAGGTGTACAAAGGGGTGTTCCCTGATGGAAAAATAGTTGCAATCAAAAGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAAAATGAAATCGAGTTACTTTCAAGAGTTCATCACAAGAATCTTGTTAGCCTAGTTGGATTCTGCTTTGAACAAGGAGAACAAATGTTGGTTTATGAATATATCTCCAATGGAATACTTAGGGAGGGTTTGTTAGGGAAATATGGTACTCAACTTGATTGGAAGAGGAGACTCCCAAAGGTTGCAGATTTTGGCTTGTCTAAGCTGCTTTCAGACAGTGAGAAAGGTCATGTTTCAACTCAGGTTAAAGGGACATTGGGCTATCTAGATCCTGAATATTACATGACAACAACTAACCGAAAAGAGTGA 3195 0.3897 MDEVRVGVSSCSSEAVQAQSRDTVEETAASSSSGWSPRELAFAAFVPRDKEEQQEDERVNAAGKFLKYRAFVRRPLVGRLTKEIVETYRICNPQFKYSEDLNPKRFLTSPSIGVLNDGYDNANSDLILTVNLVLIHVEKSRRYTVKDLLGHGTFGQVAKCWDSETNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSIGIVQLFSKQILCGLALLKDAGIIHCDLKPENILLCTSSVKQAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEIIGGQPPDYVLRDAKNTSKFFKCIGSLQNIEISEGSKNGRVYQALTEEEYEAERYSHDLEMSPIQSGPVSKTSALNSNNFTGKIPPSLGKLSKLYWLDLAENQLTGPIPVSTSTTPGLDLLLKAKHFHFSKNQLSDSIPPKLFNSDMKLIHILFDNNDLSGSIPSTIGLVQTVEVLRLDRNFLTGEVPSNLNNLSNINELNLAHNNLSGPLPDLTSMDTLNYVDLSKNNFDPSEAPSWLTTIPTLTTLIMENGSLEGPLPPKLFSLPQIQQVKLRSNTLNNTLDMGDNICPQLQLVDLQDNKISTFTVGSQYKNTLILIGNPVCNIALSNTNYCNLQQKPKPYSTSLVKCGAITCPSKQKLSPQSCECVYPYQGTFLFRAPLFRELSNISTFHSLEMSLFSFFTKLALTPGAVFLQNTSFNDDDYLEMQLALFPPTGLYFKRSEVQRIGFSLSHQTYKPPHEFGPYYFKAFDYAFPDLRKGTTFSRGIIIAIAAGSVFLVLCLIGSVVYAILQKKRAEKAIGISRPFASWAPSGKDSGGAPQLKGARWFSYDELKKCTNNFSGSNELGSGGYGKVYKGVFPDGKIVAIKRAQQGSMQGGLEFKNEIELLSRVHHKNLVSLVGFCFEQGEQMLVYEYISNGILREGLLGKYGTQLDWKRRLPKVADFGLSKLLSDSEKGHVSTQVKGTLGYLDPEYYMTTTNRKE 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01789 1064 SMART serkin_6 143 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01789 1064 ProSitePatterns Protein kinases ATP-binding region signature. 927 949 IPR017441 GO:0005524
Trre15g01789 1064 MobiDBLite consensus disorder prediction 10 35 - -
Trre15g01789 1064 FunFam Leucine-rich repeat protein kinase family protein 889 996 - -
Trre15g01789 1064 Gene3D Ribonuclease Inhibitor 507 575 IPR032675 -
Trre15g01789 1064 Gene3D Ribonuclease Inhibitor 425 506 IPR032675 -
Trre15g01789 1064 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Trre15g01789 1064 Gene3D Phosphorylase Kinase; domain 1 108 223 - -
Trre15g01789 1064 SUPERFAMILY Protein kinase-like (PK-like) 137 380 IPR011009 -
Trre15g01789 1064 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Trre15g01789 1064 SUPERFAMILY Protein kinase-like (PK-like) 901 1059 IPR011009 -
Trre15g01789 1064 ProSiteProfiles Protein kinase domain profile. 143 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01789 1064 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 106 222 - -
Trre15g01789 1064 Gene3D Transferase(Phosphotransferase) domain 1 224 424 - -
Trre15g01789 1064 PANTHER RECEPTOR-LIKE PROTEIN 55 1021 1059 - -
Trre15g01789 1064 ProSiteProfiles Protein kinase domain profile. 921 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01789 1064 Pfam Protein kinase domain 143 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01789 1064 SUPERFAMILY L domain-like 435 684 - -
Trre15g01789 1064 Gene3D Transferase(Phosphotransferase) domain 1 1017 1063 - -
Trre15g01789 1064 FunFam Predicted protein 476 697 - -
Trre15g01789 1064 Pfam Protein tyrosine and serine/threonine kinase 925 1016 IPR001245 GO:0004672|GO:0006468
Trre15g01789 1064 Gene3D Ribonuclease Inhibitor 576 687 IPR032675 -
Trre15g01789 1064 Gene3D Phosphorylase Kinase; domain 1 895 996 - -
Trre15g01789 1064 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01789 Trre-Chr15 14354047 14369100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01789 482 661 Receptor kinase-like Gene Family AT1G79620 28.037 1.53e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Trre15g01789 Pkinase 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01789 - - gmx:100792249 970.304