Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01774 ATGGAGAGTTCAATTACCATTCAATGGTTAAATACTCTTCTACTATTTGCACTGCTGTTACTTAAGACACAAGGACAGTTTGTTCCAATAACTCGGGTCGAAAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGCCCTCCGGCTTATCATTTTCATGAAGGACATGAAGAAGGAGTTAACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGTCACAATGTCACATACTGTCTTTATCGTAAGGACAGTCGATTAGGTTCGTCGAATCAAATGGAAGAGCAAACTTACTTTTCTGGATATTTAAGTGATAAGCAACAATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGATCATCATTTACTGGTGATATTGAAGAAGTTGATCCAGAGACAAATTTGCACTACAGAGGACAAAGGATTTTTAATGCTGTAATGGAAGAGTTACTAGCAAAAGGAATGGATCATGCTGAAAATGCTATAATTTCTGGATTTAAATGTGTCTCGGATGCTGGTTATTTTGTTAATGTAAAGGATATCTCAGGAGATTATTATATTGAAGATTATTATAGTCAAGTTGTTGAAACACATGGATCGGAGAAGAATTTGCCACAATCCTGCACTTCAAAACTCAGTCCAGGACTTTGCTTTTTTCCTCAATATATGGCATCAAGTATCAGAACACCACTCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGCCGCTGATCCGAATGGCCAATGGAGTAGCTGCAAGACTAATCTAAACAACTGCTCACCTGAACAACTAAATATAATGCAAGACTATAGGACACAATTCTTGGAGGCATTGAGTCCTATAAGCAAGTCTACATCTAATGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAACCACAAGATACATGGTTTACAAGGGACTCTCCAATGGTTGGCAATAAAACAGTTGCAAAAGCAGTAGGAGACTGGTTTTATGAAAGAGATCCTTCACGTGAGATAGATTGCACTTACCCTTGTAACCCTACTTGTCAGAACCTTGTTTTGGATGTTGCAGCCTACCCGGGAGTACACTAG 1134 0.3915 MESSITIQWLNTLLLFALLLLKTQGQFVPITRVESAVSKGAVCLDGSPPAYHFHEGHEEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSNQMEEQTYFSGYLSDKQQYNPDFYNWNRVKIRYCDGSSFTGDIEEVDPETNLHYRGQRIFNAVMEELLAKGMDHAENAIISGFKCVSDAGYFVNVKDISGDYYIEDYYSQVVETHGSEKNLPQSCTSKLSPGLCFFPQYMASSIRTPLFIVNAAYDSWQIKNILAPGAADPNGQWSSCKTNLNNCSPEQLNIMQDYRTQFLEALSPISKSTSNGMFIDSCYVHCQTEPQDTWFTRDSPMVGNKTVAKAVGDWFYERDPSREIDCTYPCNPTCQNLVLDVAAYPGVH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01774 377 PANTHER NOTUM-RELATED 174 365 IPR004963 GO:0016787
Trre15g01774 377 Pfam Pectinacetylesterase 175 348 IPR004963 GO:0016787
Trre15g01774 377 Pfam Pectinacetylesterase 22 173 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01774 Trre-Chr15 14221615 14224753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01774 8 368 Carbohydrate Esterase AT4G19420 53.095 4.00e-168 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01774 K19882 - gmx:100780707 541.962