Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01773 ATGGAGAGTTCAATTACCATTCAATGGTTAAATACTCTTCTACTATTTGCACTGCTGTTACTTAAGACACAAGGACAGTTTGTTCCAATAACTCGGGTCGAAAGCGCGGTATCAAAAGGAGCTGTGTGTTTGGATGGAAGCCCTCCGGCTTATCATTTTCATGAAGGACATGAAGAAGGAGTTAACAACTGGATTGTTCACATTGAGGGAGGTGGATGGTGTCACAATGTCACATACTGTCTTTATCGTAAGGACAGTCGATTAGGTTCGTCGAATCAAATGGAAGAGCAAACTTACTTTTCTGGATATTTAAGTGATAAGCAACAATATAATCCAGATTTCTACAATTGGAATAGAGTCAAGATTAGGTACTGTGATGGATCATCATTTACTGGTGATATTGAAGAAGTTGATCCAGAGACAAATTTGCACTACAGAGGACAAAGGATTTTTAATGCTGTAATGGAAGAGTTACTAGCAAAAGGAATGGATCATGCTGAAAATGCTATAATTTCTGGATGTTCTGCTGGAGGATTAGCTGCAATTTTACACTTTAAATGTGTCTCGGATGCTGGTTATTTTGTTAATGTAAAGGATATCTCAGGAGATTATTATATTGAAGATTATTATAGTCAAGTTGTTGAAACACATGGATCGGAGAAGAATTTGCCACAATCCTGCACTTCAAAACTCAGTCCAGGACTTTGCTTTTTTCCTCAATATATGGCATCAAGTATCAGAACACCACTCTTCATTGTAAATGCAGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCTGGTGCCGCTGATCCGAATGGCCAATGGAGTAGCTGCAAGACTAATCTAAACAACTGCTCACCTGAACAACTAAATATAATGCAAGACTATAGGACACAATTCTTGGAGGCATTGAGTCCTATAAGCAAGTCTACATCTAATGGAATGTTCATAGACTCTTGCTATGTCCACTGCCAAACAGAACCACAAGATACATGGTTTACAAGGGACTCTCCAATGGTTGGCAATAAAACAGTTGCAAAAGCAGTAGGAGACTGGTTTTATGAAAGAGATCCTTCACGTGAGATAGATTGCACTTACCCTTGTAACCCTACTTGTCAGAACCTTGTTTTGGATGTTGCAGCCTACCCGGGAGTACACTAG 1167 0.3925 MESSITIQWLNTLLLFALLLLKTQGQFVPITRVESAVSKGAVCLDGSPPAYHFHEGHEEGVNNWIVHIEGGGWCHNVTYCLYRKDSRLGSSNQMEEQTYFSGYLSDKQQYNPDFYNWNRVKIRYCDGSSFTGDIEEVDPETNLHYRGQRIFNAVMEELLAKGMDHAENAIISGCSAGGLAAILHFKCVSDAGYFVNVKDISGDYYIEDYYSQVVETHGSEKNLPQSCTSKLSPGLCFFPQYMASSIRTPLFIVNAAYDSWQIKNILAPGAADPNGQWSSCKTNLNNCSPEQLNIMQDYRTQFLEALSPISKSTSNGMFIDSCYVHCQTEPQDTWFTRDSPMVGNKTVAKAVGDWFYERDPSREIDCTYPCNPTCQNLVLDVAAYPGVH 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01773 388 Pfam Pectinacetylesterase 22 359 IPR004963 GO:0016787
Trre15g01773 388 PANTHER NOTUM-RELATED 14 376 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01773 Trre-Chr15 14221615 14224753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01773 8 387 Carbohydrate Esterase AT4G19420 54.206 3.70e-177 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01773 K19882 - gmx:100780707 565.074