Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01767 ATGGACAGTGATGCAATGCGAAGCAAAGAGTACTATAACTATTGTGCCCTGAAGGATTTAGAATTGAATTTTAATGAATATGATGGAACTTTCTCTTTCTGTTTTTGGATTTATTTCATCAATTCTACTACATTTCCTGCTATCATTCTTCATCAGATTCACTCTGACATTTCCGAAAGTGGTCCTTTTCTCGTTATTAACGATAATAAGAGAATCAATGTTTTACCAGTTCTGTACTTACACCAAGAAGCTCCTGTTACTTGCTCCGGTCCTTGGACAGAAGTTCCACATGTTACTGTTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATGTTGGATGTGAGGTTTGTCCAGATTATATTCGGCTTCAAATTAATGGGGACATTGTAGGAGAAAAGTCACTGTCGGAATCCAAATCAAGAAATTTGAAGGATTTACATTTGGCGAATCGTTGTGGAGACATAAGTGGTGTGCAGGGTTATGTCCACAATTATGAAGGATTCCATACTGTTTCTTGTATCAAAGATCATCATTTAAAGGACCCTCCTCTGAAATTATCAATAGATGAATCATCTGTCTCTGAGGTTGAAGAGGAAAGTGATGTTGTTTGGGGCATTGTTGGTGGCAAAGCATCTTGTCGCAGAAATTTCTCATTAGACGTTGTTTTATCAGATGCATTTGGACAACTGGTAGATAGGGAGGATGAGGTTTTTGCTTCACTTGTGTATGCTGACACGGGGGCTCCAGTGGAGAATACAAGTGATGGCGAAGCACCCCTTTTGTCTATCTATGATGGAATTGAATTTTCTTCCTTTGAAAGATCTAGCAAGTTTTTGTTGGGTCGTGCATCATTTAAGCTCAGGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAGATTTTTTGTTCCAAAATTAGGAAATTATCCTTTCCTTCAGACAAACACCCGTCCAATTCGATGCATCTCCAGGAGCCGTAACACAAAATTATCCACTTTGGTGTGGAAAAAGTCAACCTATGCTCTCCAAAGACTCAATTTGTCACAATCTTCCGCAATTGGTGATGTGTCATTGGAACATGCGAATTCTGGTCATGTAGAAAAAACCAATCCACTGATGAAGCGGTTTAGAGTTGGATTTGACAAGATATCTGTATCAGTTAAGGCCGACCCACCCTCCTTAAAGCAACCTGGTGTCGAATGTAATTCTCATGTATGGCCTGCTAATCAGGTTGATAATGGGTTTCCGACAAGAATGGATGGAAGATCTCTTAACGTTGAAGAAGCAGATGACGCTCCATCTGAATCATCAGAGAGTATAGAGGAGAGAAATTCACCTTCAAACAGTATAGAATGTAGAAGATATCCAATATCTGATATGACCATTTTCAAATACTGCCTGGCAGGATTGGCTGAGAGATCTAAGATGCTTAAAGAAATTGCCACATTTGCTTCTGACAAAGAAATTTCAGAGTTGGCTCATGATGTTTCACACTATTCAGGATGTTCCCACCTTGGAAACCAAATATTAATTGCCAAAAGATTGATAGAGGATGGAACTAATCTTTGGTTGGCAATGTCTCCAAGCAATCACCCCGTTCCTTGGGAGAGTGCAGTTTATGAGATTGAAGAACAATTCATGAAGATTGCTTCTTGTGGGTCAAGATCTCTCTCTAATCAGGACTTTGAGACTCTAAGAAAGATTGCTGGATGTCAAGAATATTTAGCACAAGAAAACTTTGAGAAGTTGTGGTGCTGGTTGTACCCTGTAGCTTGTGTAATATCCAACGACTGTGTAAATCCTATCTGGAATTCCATTTCACCTAAATGGATTGAAGGATTCATCACCAAGGAGGAAGCAGAAGCTTCACTTCAAGGTCCGACAGGATTTCAAGAACCTGGTACTTTTATACTTCGGTTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCCGGTAGCCTAATTGTTACTTATGTTGGTAGTGACTACAAACTGCGCCACAGACTACTTTCAACGGATCATATTTATGGCTCTGATAATCAAAGAATTGATGTAAAGCCATTGCAAGATATGCTACTGGCAGAACCTGAGCTGTCTCGGTTGGGAAGGTAA 2124 0.4007 MDSDAMRSKEYYNYCALKDLELNFNEYDGTFSFCFWIYFINSTTFPAIILHQIHSDISESGPFLVINDNKRINVLPVLYLHQEAPVTCSGPWTEVPHVTVDFEFPLEKWVHVGCEVCPDYIRLQINGDIVGEKSLSESKSRNLKDLHLANRCGDISGVQGYVHNYEGFHTVSCIKDHHLKDPPLKLSIDESSVSEVEEESDVVWGIVGGKASCRRNFSLDVVLSDAFGQLVDREDEVFASLVYADTGAPVENTSDGEAPLLSIYDGIEFSSFERSSKFLLGRASFKLRISQLSSKCDNRLFLIRFFVPKLGNYPFLQTNTRPIRCISRSRNTKLSTLVWKKSTYALQRLNLSQSSAIGDVSLEHANSGHVEKTNPLMKRFRVGFDKISVSVKADPPSLKQPGVECNSHVWPANQVDNGFPTRMDGRSLNVEEADDAPSESSESIEERNSPSNSIECRRYPISDMTIFKYCLAGLAERSKMLKEIATFASDKEISELAHDVSHYSGCSHLGNQILIAKRLIEDGTNLWLAMSPSNHPVPWESAVYEIEEQFMKIASCGSRSLSNQDFETLRKIAGCQEYLAQENFEKLWCWLYPVACVISNDCVNPIWNSISPKWIEGFITKEEAEASLQGPTGFQEPGTFILRFPTSRSWPHPDAGSLIVTYVGSDYKLRHRLLSTDHIYGSDNQRIDVKPLQDMLLAEPELSRLGR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01767 707 MobiDBLite consensus disorder prediction 430 453 - -
Trre15g01767 707 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 149 IPR013320 -
Trre15g01767 707 Gene3D SH2 domain 601 705 IPR036860 -
Trre15g01767 707 ProSiteProfiles Src homology 2 (SH2) domain profile. 614 671 IPR000980 -
Trre15g01767 707 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 14 703 IPR001217 GO:0003700|GO:0006355|GO:0007165
Trre15g01767 707 SUPERFAMILY SH2 domain 609 676 IPR036860 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01767 Trre-Chr15 14194619 14203220 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Trre15g01767 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01767 - - cam:101502730 1100.5