Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01759 ATGAACATCTTCCAAAAGATCTTCCAAGCCATGAGACCGCGGCGGAATAACACTTTCCGCCGATCTGACTCAACAAAAGAGCCACTAACTGAATTTCCTCCAGAGAACAGTGATGTTCCTGAAGGTCATGTGCCTGTGTACGTGGGAGAGGAAATGGTCCGGTTCATTGTGACTGCTGAGCTGCTGAACCATCCGGTTTTTGTGAACCTGCTCAACATTTCGGCTCAGGAATATGGTTATCAAGGTGTGCTTCGAATTCCTTGCCGTGTTGTTGTGTTTGAGCGTGTTCTTGAAGCGATTCGAGCTGGTGGTAGCTTGGGTGCAATTCATGAACTCCTCAAAGATGAGTGA 351 0.4758 MNIFQKIFQAMRPRRNNTFRRSDSTKEPLTEFPPENSDVPEGHVPVYVGEEMVRFIVTAELLNHPVFVNLLNISAQEYGYQGVLRIPCRVVVFERVLEAIRAGGSLGAIHELLKDE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01759 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 96 IPR003676 GO:0009733
Trre15g01759 116 MobiDBLite consensus disorder prediction 15 40 - -
Trre15g01759 116 Pfam Auxin responsive protein 26 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01759 Trre-Chr15 14099777 14100127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01759 14 100 Calmodulin-binding Proteins AT3G43120 38.202 3.39e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01759 K14488 - vvi:100258180 122.479