Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01749 ATGATCATTGTTGAGCTTACTGACCATAGTGGTAAATGTGAATGTGCGTTGTTTGGTGATTACGTTGATGAGGTGAATAAGAAGATTGAGAAATCTGCTGTTGGGTTGCCTATTGTTGTCATTCAGTTTGCCAAGGTTAAAAATTTTAGAGATAAGGCATCAATCCAGAATGTGATTAACACTACTAGGATTTTCATTAATCCAGATATTCCGGAGGTCGAAACATTCAAGAATAGCATTGTTGTGCATGGTATTGAGTCATGTTCCTTCTTTGTTGCTCAATCTAAGGCAAATAATTCTGGACCCCATCCCGTTGAATTTGATAGTTTGGTTGTCAGTGTCCAGTTAATAGTCCTTCCAAAACATTGTCCAATCCTATAG 381 0.3753 MIIVELTDHSGKCECALFGDYVDEVNKKIEKSAVGLPIVVIQFAKVKNFRDKASIQNVINTTRIFINPDIPEVETFKNSIVVHGIESCSFFVAQSKANNSGPHPVEFDSLVVSVQLIVLPKHCPIL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01749 126 CDD RPA1_DBD_B_like 1 77 - -
Trre15g01749 126 Gene3D - 1 86 IPR012340 -
Trre15g01749 126 SUPERFAMILY Nucleic acid-binding proteins 4 80 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01749 Trre-Chr15 14012330 14013644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01749 3 94 Core DNA Replication Machinery Family AT2G06510 29.474 2.78e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01749 - - tpra:123891654 139.813