Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01746 ATGAAACACTGTATTTTGGGTTATGCACTTGTTATTACTCTTTGTGTTTTAAGCTGTTTGGTTGACATTTCACAAGCTCAAACTGCAAACGCCACCACAGATCCTTCTGAAGCAAGAGTTATAAATTCAATATTTACGGAATGGAAAATATCAGCAAATCAAACTCAATGGAACATAAGCGGGGAGCTATGTAGCGGAAGTGCCGTTGATAGCAATACCATTACCATCGATGACTCCTCCTATAACCCATTCATCAAATGTGATTGTTCCTTTAACAACCAAACTACTTGCCGCATCACTGCACTGAAAGTTTATGCATTGGATGTGGTTGGTGAAATTCCACCAGAGCTATGGACTCTTGTTTATCTCACCAATTTCAGGAACCTTGGCCAGAATTACTTGAAGGGGTCCTTACCTCCGGCAATTGGAAATCTGACTCGTATGCAATACATGACCTTTGGTATCAATGCTTTGTCAGGAGAGCTTCCAAAGGAGTTGGGAGATCTTACTCAGTTGATTGCATTGAGTTTTGGGACTAATAACTTCTCAGGATCTTTGCCATCTGAACTTGGAAAGTTGGTCAAACTAGAACAACTCTACATGGATAGCTCAGGAATCAGTGGTCCTATTCCACCAACAATGGCAAGCCTTAAGAATTTGGGGACAGTATGGGCTTCTGACACTGAACTCACAGGTCAAATACCCGACTTCATAGGAAATTGGTCTAAGCTTCAATCCTTGAGGTTTCGGGGTACTTCTTTTGAAAGTCCATTGCCCTCATCATTTTCCTCTTTGACTTCTTTGACAGATTTGATGATAAGTGGTCTATCAAATGGGAGCTCATCATTGGATGTAATAAGGAACATGAAGTCTTTAACAGTCTTGGAATTGAGAAATTGCAATATTTCTGGTTCAATTCCTTCAACCTTGGGAGAATTTCAGAATTTGACTCATCTGGACTTGAGCTTCAATAATATCTCAGGACAAATTCCTAGTTCAATTTTCAATTTGAGTTATCTCACTTCCTTGTTTCTTGGAAATAACACACTTAGTGGCATTCTTCCTCGGCAGAAAAGTTCATTTCTTAAAAATATTGACTTGTCATACAATGATTTATCAGGAAGCCTACCCACTTGGATAAACGAACCAAATTTACAACTGAACATAGTTGCCAACAACTTGACAATAGAAAATTCAAATAGCAGTGGTTTGCCTACTGGGATTAACTGTCTCCAAAAAAAATTTTCATGCGATGGTGGTGCTGCAAGATATTTTAACTTTGCAATCAAGTGTGGTGGTCCCCAAATTAGAACTACAGATGGAATTGTGTATGAAGCAGACAATCAGACACTTGGCCCGGCTACATACTTTGTTACTGATACAAATAGATGGGCAGTTAGTAATGTTGGAATATTTATTGGGAAAAACAAGCCTCTGTTCAACTTTATTGGTTCAAATCAGTTCAATGTTACTGTGAACGCAGAGCTTTTAGAACAATCAATTCGGATTTTAGAACAAAGAGTTTTGTTTCAAACGGCTCGTCTCTCCGCATCATCATTAAGATATTATGGTCTAGGGTTAGACAATGGTTTTTACAACATTACCCTCCAATTTGCGGAAACAACTATTCTAGATTCTACAACATGGAAAAGCCTTGCGAGACGAGTATTTGATATTTATATCCAGGGAAATCGTGTTTTGAAGGATTTTGACATACAAAAAGAAGCTGGTGGTGTCTCTTACAAAGCTGTTGAAAAGCAATTTAGGTTTGAAGTGAAAGAAAACTACCTTGAAGTCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCCAACCAAGGTACTTATGGGCCCTTGATTCAAACCATCAGTGCTATCCCAGATTTTGTAACTACTATCAACACCAAACCTAAAAAGAATAGAGCAGGTCTAATCATTGGAATTGTTGTGGGCGTTGGAGTTGTTTTCTTTCTAGCAGTTTTTGCCATTTCCTATATCATTCGGACAAGAAAACTCTATAATGACGATGATGATCTTTCTAGCATTGATATGATGCCAAACACTTTCAGCTATTATGAATTAAAAAATGCTACAAGTAACTTCCATCGTGACAATAAACTTGGAGAAGGGGGTTTTGGACCTGTTTATAAGGGAAAACTTAATGATGGAAGATTTGTAGCTGTGAAACAATTATCCATAGGATCCCACCAAGGAAAGAGCCAATTTATAGCTGAGATTGCTACAATATCTGCTGTACAGCACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTATGAATATTTAGAAAATAAGAGTCTTGATCAAGTATTGTTTGGAAATGTTTTATTCCTCAATTGGTCAACCCGCTATGATGTTTGTATTGGTGTTGCAAGAGGTTTGACATATTTACACGAGGAGTCACGACTCCGTATTGTACACCGTGATGTGAAAGCTAGTAATATTCTACTAGACTCCGACCTTGTCCCAAAACTATCTGACTTTGGATTGGCCAAATTATTTGATGATAAAAAAACTCATATAAGCACCCATGTTGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTCACGGAGAAAGCAGATGTTTATTCCTTTGGTGTTGTGGCTCTCGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCGAGTTTGGAAGAAGAGAAGATGTATCTTCTAGATTGGGCTTGGCAGGTCCACGAAAAGAAGTGTATAAATGATCTGATAGATCCTAGACTATCAGAGTTCAACATGGAAGAAGCACAACGCCTTGTAGGAATAGCACTTTTGTGCACTCAGACATCGCCAAATTTACGACCATCGATGTCACGTGTAGTGGCAATGCTCTTAGGAGATATTGAAGTGAGCGCTTTAACATCAAGGCCTGAATACTTAACTGACTGGAATTTTGATGATGTGAGCAGCTTCATAACTGACATTTCAATGAACGGATTAGAAGATACAAGTGATTACAATTCAACAAGTACCAGTGCATATATTCATTCACCAAATGATCCTTCTAAACCAATCCTTCACATTTAG 3102 0.3862 MKHCILGYALVITLCVLSCLVDISQAQTANATTDPSEARVINSIFTEWKISANQTQWNISGELCSGSAVDSNTITIDDSSYNPFIKCDCSFNNQTTCRITALKVYALDVVGEIPPELWTLVYLTNFRNLGQNYLKGSLPPAIGNLTRMQYMTFGINALSGELPKELGDLTQLIALSFGTNNFSGSLPSELGKLVKLEQLYMDSSGISGPIPPTMASLKNLGTVWASDTELTGQIPDFIGNWSKLQSLRFRGTSFESPLPSSFSSLTSLTDLMISGLSNGSSSLDVIRNMKSLTVLELRNCNISGSIPSTLGEFQNLTHLDLSFNNISGQIPSSIFNLSYLTSLFLGNNTLSGILPRQKSSFLKNIDLSYNDLSGSLPTWINEPNLQLNIVANNLTIENSNSSGLPTGINCLQKKFSCDGGAARYFNFAIKCGGPQIRTTDGIVYEADNQTLGPATYFVTDTNRWAVSNVGIFIGKNKPLFNFIGSNQFNVTVNAELLEQSIRILEQRVLFQTARLSASSLRYYGLGLDNGFYNITLQFAETTILDSTTWKSLARRVFDIYIQGNRVLKDFDIQKEAGGVSYKAVEKQFRFEVKENYLEVHLFWAGKGTCCIPNQGTYGPLIQTISAIPDFVTTINTKPKKNRAGLIIGIVVGVGVVFFLAVFAISYIIRTRKLYNDDDDLSSIDMMPNTFSYYELKNATSNFHRDNKLGEGGFGPVYKGKLNDGRFVAVKQLSIGSHQGKSQFIAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQVLFGNVLFLNWSTRYDVCIGVARGLTYLHEESRLRIVHRDVKASNILLDSDLVPKLSDFGLAKLFDDKKTHISTHVAGTIGYLAPEYAMRGHLTEKADVYSFGVVALELVSGRPNSDSSLEEEKMYLLDWAWQVHEKKCINDLIDPRLSEFNMEEAQRLVGIALLCTQTSPNLRPSMSRVVAMLLGDIEVSALTSRPEYLTDWNFDDVSSFITDISMNGLEDTSDYNSTSTSAYIHSPNDPSKPILHI 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01746 1033 FunFam Leucine-rich repeat receptor-like protein kinase 424 628 - -
Trre15g01746 1033 Gene3D Phosphorylase Kinase; domain 1 674 777 - -
Trre15g01746 1033 Pfam Malectin domain 427 624 IPR021720 -
Trre15g01746 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 821 833 IPR008271 GO:0004672|GO:0006468
Trre15g01746 1033 Gene3D Transferase(Phosphotransferase) domain 1 778 979 - -
Trre15g01746 1033 Pfam Leucine Rich repeats (2 copies) 290 327 IPR025875 -
Trre15g01746 1033 SMART serkin_6 702 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01746 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 999 - -
Trre15g01746 1033 FunFam Putative LRR receptor-like serine/threonine-protein kinase 778 981 - -
Trre15g01746 1033 Pfam Protein tyrosine and serine/threonine kinase 704 969 IPR001245 GO:0004672|GO:0006468
Trre15g01746 1033 SUPERFAMILY L domain-like 97 395 - -
Trre15g01746 1033 ProSiteProfiles Leucine-rich repeat profile. 315 337 IPR001611 GO:0005515
Trre15g01746 1033 FunFam Os05g0263100 protein 38 278 - -
Trre15g01746 1033 Gene3D - 424 628 - -
Trre15g01746 1033 CDD STKc_IRAK 708 969 - -
Trre15g01746 1033 ProSiteProfiles Protein kinase domain profile. 702 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01746 1033 Gene3D Ribonuclease Inhibitor 41 278 IPR032675 -
Trre15g01746 1033 FunFam Putative LRR receptor-like serine/threonine-protein kinase 279 402 - -
Trre15g01746 1033 FunFam Leucine-rich repeat receptor-like protein kinase 671 777 - -
Trre15g01746 1033 SUPERFAMILY Protein kinase-like (PK-like) 683 989 IPR011009 -
Trre15g01746 1033 MobiDBLite consensus disorder prediction 1013 1033 - -
Trre15g01746 1033 Gene3D Ribonuclease Inhibitor 279 396 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01746 Trre-Chr15 13971660 13988217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01746 148 995 Receptor kinase-like Gene Family AT1G56120 61.268 0.0 1064
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g01746 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01746 - - mtr:25502389 1668.67