Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01745 ATGAAACACTGTATTTTGGGTTATGCACTTGTTATTACTCTTTGTGTTTTAAGCTGTTTGGTTGACATTTCACAAGCTCAAACTGCAAACGCCACCACAGATCCTTCTGAAGCAAGAGTTATAAATTCAATATTTACGGAATGGAAAATATCAGCAAATCAAACTCAATGGAACATAAGCGGGGAGCTATGTAGCGGAAGTGCCGTTGATAGCAATACCATTACCATCGATGACTCCTCCTATAACCCATTCATCAAATGTGATTGTTCCTTTAACAACCAAACTACTTGCCGCATCACTGCACTGAAAGTTTATGCATTGGATGTGGTTGGTGAAATTCCACCAGAGCTATGGACTCTTGTTTATCTCACCAATTTGAACCTTGGCCAGAATTACTTGAAGGGGTCCTTACCTCCGGCAATTGGAAATCTGACTCGTATGCAATACATGACCTTTGGTATCAATGCTTTGTCAGGAGAGCTTCCAAAGGAGTTGGGAGATCTTACTCAGTTGATTGCATTGAGTTTTGGGACTAATAACTTCTCAGGATCTTTGCCATCTGAACTTGGAAAGTTGGTCAAACTAGAACAACTCTACATGGATAGCTCAGGAATCAGTGGTCCTATTCCACCAACAATGGCAAGCCTTAAGAATTTGGGGACAGTATGGGCTTCTGACACTGAACTCACAGGTCAAATACCCGACTTCATAGGAAATTGGTCTAAGCTTCAATCCTTGAGGTTTCGGGGTACTTCTTTTGAAAGTCCATTGCCCTCATCATTTTCCTCTTTGACTTCTTTGACAGATTTGATGATAAGTGGTCTATCAAATGGGAGCTCATCATTGGATGTAATAAGGAACATGAAGTCTTTAACAGTCTTGGAATTGAGAAATTGCAATATTTCTGGTTCAATTCCTTCAACCTTGGGAGAATTTCAGAATTTGACTCATCTGGACTTGAGCTTCAATAATATCTCAGGACAAATTCCTAGTTCAATTTTCAATTTGAGTTATCTCACTTCCTTGTTTCTTGGAAATAACACACTTAGTGGCATTCTTCCTCGGCAGAAAAGTTCATTTCTTAAAAATATTGACTTGTCATACAATGATTTATCAGGAAGCCTACCCACTTGGATAAACGAACCAAATTTACAACTGAACATAGTTGCCAACAACTTGACAATAGAAAATTCAAATAGCAGTGGTTTGCCTACTGGGATTAACTGTCTCCAAAAAAAATTTTCATGCGATGGTGGTGCTGCAAGATATTTTAACTTTGCAATCAAGTGTGGTGGTCCCCAAATTAGAACTACAGATGGAATTGTGTATGAAGCAGACAATCAGACACTTGGCCCGGCTACATACTTTGTTACTGATACAAATAGATGGGCAGTTAGTAATGTTGGAATATTTATTGGGAAAAACAAGCCTCTGTTCAACTTTATTGGTTCAAATCAGTTCAATGTTACTGTGAACGCAGAGCTTTTAGAACAATCAATTCGGATTTTAGAACAAAGAGTTTTGTTTCAAACGGCTCGTCTCTCCGCATCATCATTAAGATATTATGGTCTAGGGTTAGACAATGGTTTTTACAACATTACCCTCCAATTTGCGGAAACAACTATTCTAGATTCTACAACATGGAAAAGCCTTGCGAGACGAGTATTTGATATTTATATCCAGGGAAATCGTGTTTTGAAGGATTTTGACATACAAAAAGAAGCTGGTGGTGTCTCTTACAAAGCTGTTGAAAAGCAATTTAGGTTTGAAGTGAAAGAAAACTACCTTGAAGTCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCCAACCAAGGTACTTATGGGCCCTTGATTCAAACCATCAGTGCTATCCCAGATTTTGTAACTACTATCAACACCAAACCTAAAAAGAATAGAGCAGGTCTAATCATTGGAATTGTTGTGGGCGTTGGAGTTGTTTTCTTTCTAGCAGTTTTTGCCATTTCCTATATCATTCGGACAAGAAAACTCTATAATGACGATGATGATCTTTCTAGCATTGATATGATGCCAAACACTTTCAGCTATTATGAATTAAAAAATGCTACAAGTAACTTCCATCGTGACAATAAACTTGGAGAAGGGGGTTTTGGACCTGTTTATAAGGGAAAACTTAATGATGGAAGATTTGTAGCTGTGAAACAATTATCCATAGGATCCCACCAAGGAAAGAGCCAATTTATAGCTGAGATTGCTACAATATCTGCTGTACAGCACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTATGAATATTTAGAAAATAAGAGTCTTGATCAAGTATTGTTTGGAAATGTTTTATTCCTCAATTGGTCAACCCGCTATGATGTTTGTATTGGTGTTGCAAGAGGTTTGACATATTTACACGAGGAGTCACGACTCCGTATTGTACACCGTGATGTGAAAGCTAGTAATATTCTACTAGACTCCGACCTTGTCCCAAAACTATCTGACTTTGGATTGGCCAAATTATTTGATGATAAAAAAACTCATATAAGCACCCATGTTGCTGGGACAATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTCACGGAGAAAGCAGATGTTTATTCCTTTGGTGTTGTGGCTCTCGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCGAGTTTGGAAGAAGAGAAGATGTATCTTCTAGATTGGGCTTGGCAGGTCCACGAAAAGAAGTGTATAAATGATCTGATAGATCCTAGACTATCAGAGTTCAACATGGAAGAAGCACAACGCCTTGTAGGAATAGCACTTTTGTGCACTCAGACATCGCCAAATTTACGACCATCGATGTCACGTGTAGTGGCAATGCTCTTAGGAGATATTGAAGTGAGCGCTTTAACATCAAGGCCTGAATACTTAACTGACTGGAATTTTGATGATGTGAGCAGCTTCATAACTGACATTTCAATGAACGGATTAGAAGATACAAGTGATTACAATTCAACAAGTACCAGTGCATATATTCATTCACCAAATGATCCTTCTAAACCAATCCTTCACATTTAG 3099 0.3859 MKHCILGYALVITLCVLSCLVDISQAQTANATTDPSEARVINSIFTEWKISANQTQWNISGELCSGSAVDSNTITIDDSSYNPFIKCDCSFNNQTTCRITALKVYALDVVGEIPPELWTLVYLTNLNLGQNYLKGSLPPAIGNLTRMQYMTFGINALSGELPKELGDLTQLIALSFGTNNFSGSLPSELGKLVKLEQLYMDSSGISGPIPPTMASLKNLGTVWASDTELTGQIPDFIGNWSKLQSLRFRGTSFESPLPSSFSSLTSLTDLMISGLSNGSSSLDVIRNMKSLTVLELRNCNISGSIPSTLGEFQNLTHLDLSFNNISGQIPSSIFNLSYLTSLFLGNNTLSGILPRQKSSFLKNIDLSYNDLSGSLPTWINEPNLQLNIVANNLTIENSNSSGLPTGINCLQKKFSCDGGAARYFNFAIKCGGPQIRTTDGIVYEADNQTLGPATYFVTDTNRWAVSNVGIFIGKNKPLFNFIGSNQFNVTVNAELLEQSIRILEQRVLFQTARLSASSLRYYGLGLDNGFYNITLQFAETTILDSTTWKSLARRVFDIYIQGNRVLKDFDIQKEAGGVSYKAVEKQFRFEVKENYLEVHLFWAGKGTCCIPNQGTYGPLIQTISAIPDFVTTINTKPKKNRAGLIIGIVVGVGVVFFLAVFAISYIIRTRKLYNDDDDLSSIDMMPNTFSYYELKNATSNFHRDNKLGEGGFGPVYKGKLNDGRFVAVKQLSIGSHQGKSQFIAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQVLFGNVLFLNWSTRYDVCIGVARGLTYLHEESRLRIVHRDVKASNILLDSDLVPKLSDFGLAKLFDDKKTHISTHVAGTIGYLAPEYAMRGHLTEKADVYSFGVVALELVSGRPNSDSSLEEEKMYLLDWAWQVHEKKCINDLIDPRLSEFNMEEAQRLVGIALLCTQTSPNLRPSMSRVVAMLLGDIEVSALTSRPEYLTDWNFDDVSSFITDISMNGLEDTSDYNSTSTSAYIHSPNDPSKPILHI 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01745 1032 FunFam Os05g0263100 protein 38 277 - -
Trre15g01745 1032 MobiDBLite consensus disorder prediction 1012 1032 - -
Trre15g01745 1032 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 16 998 - -
Trre15g01745 1032 SUPERFAMILY L domain-like 77 396 - -
Trre15g01745 1032 FunFam Leucine-rich repeat receptor-like protein kinase 423 627 - -
Trre15g01745 1032 Pfam Malectin domain 426 623 IPR021720 -
Trre15g01745 1032 FunFam Putative LRR receptor-like serine/threonine-protein kinase 777 980 - -
Trre15g01745 1032 Gene3D Transferase(Phosphotransferase) domain 1 777 978 - -
Trre15g01745 1032 Gene3D - 423 627 - -
Trre15g01745 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Trre15g01745 1032 Gene3D Ribonuclease Inhibitor 279 409 IPR032675 -
Trre15g01745 1032 Gene3D Ribonuclease Inhibitor 43 278 IPR032675 -
Trre15g01745 1032 SMART serkin_6 701 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01745 1032 Pfam Leucine Rich repeats (2 copies) 289 326 IPR025875 -
Trre15g01745 1032 ProSiteProfiles Protein kinase domain profile. 701 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01745 1032 CDD STKc_IRAK 707 968 - -
Trre15g01745 1032 Gene3D Phosphorylase Kinase; domain 1 673 776 - -
Trre15g01745 1032 SUPERFAMILY Protein kinase-like (PK-like) 682 988 IPR011009 -
Trre15g01745 1032 FunFam Putative LRR receptor-like serine/threonine-protein kinase 278 401 - -
Trre15g01745 1032 Pfam Protein tyrosine and serine/threonine kinase 703 968 IPR001245 GO:0004672|GO:0006468
Trre15g01745 1032 FunFam Leucine-rich repeat receptor-like protein kinase 670 776 - -
Trre15g01745 1032 ProSiteProfiles Leucine-rich repeat profile. 314 336 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01745 Trre-Chr15 13971660 13988217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01745 147 994 Receptor kinase-like Gene Family AT1G56120 61.268 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g01745 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01745 - - mtr:25502389 1674.83