Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01728 ATGATCTGTAGAAACCCAGTTTCGTGTTTCGAACCTCGAATCAAGAAAGTAATTTCCCTGCTTAGAGCCATTGAAGACAATTTGTGTAAAGCCAACATCACAGAATGGATGCTGGAAGCTCTCGAAGCACTCGAAGACGAAATCCTCTTATATGATAATTACTCTCTAAACGGAATAACCGACGCTGCAAGATCCGCTTATTGCGCCATAGCAGTAGAATGTACAATCAAATATCTTTCAGTATCATCAACAAACCCTAACTACTTCAAAGCTGTTGAGAAGATATGGTTGGTTAGGGTTCATGCAATGGAACCTTCTTCTTCGAGGAAAGGAAGTCTTTTGTTTTCTGATGAATTGAAACAATGGAAAAGTGATTTTGAAGCTTCTCTTCTCGATTTGCGGGCTAGGGATAGGTTGACTCCTGATGGTTCCAGAAGGGATGCCCTTCAGAAGGTTGAAGTTTTCATGGAACGAGCATGCGAACTACTTGATCCTTCTTTTGTTGAATCATTGTTCAAACTTCAAACTAATCAAGTGAATCAGTAG 546 0.4011 MICRNPVSCFEPRIKKVISLLRAIEDNLCKANITEWMLEALEALEDEILLYDNYSLNGITDAARSAYCAIAVECTIKYLSVSSTNPNYFKAVEKIWLVRVHAMEPSSSRKGSLLFSDELKQWKSDFEASLLDLRARDRLTPDGSRRDALQKVEVFMERACELLDPSFVESLFKLQTNQVNQ 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01728 181 PANTHER MYB TRANSCRIPTION FACTOR 12 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01728 Trre-Chr15 13818692 13819237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01728 16 170 Single Myb Histone (SMH) Gene Family AT1G15720 27.564 1.79e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01728 - - aprc:113864424 123.635