Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01724 ATGGAAGACTTAAACATGTGGCTCTCTTTCTATATGAATGAAAGTGACAACCATGATTTCCCCATCAGAAGGTTTTGTCCTGCAAGAATGGAGCAAGATCAAGGAGGAGAGTGCAATGACCAAGAAACAGTACTTGATCATATTGAATTGTGTACTTTTGATACAACCACAACTCCTTGTTTATTAGCTTCTTCAGAAGTTGATGACTTTGTTGATAGCTTCATCAACATGGAACACTATGAAGATCAAGAGTCTCAAGAGAATCATCATCATCATCATCATCAAAGTTTTGATCACTTTGTGGTGAATGAAGAAGATGATGATGTTGATGCATACTCCATTGGATATGTTCCAACCACAATGGAGGATGAAGAATTAGAGATATGTGAGAATACCACAATCACAATGGAGGAAGAAGTTGTTGAAATGAACGGTACTTTTGGTGCTATACCACAAGCACGAGCCAGTCTCGGTATGAACCAAGGTCTTGACTTGGTCCATACGTTGCTGGCTTGTGCTGAGGCCGTAGGCTGTAGAGACAACCATCAGGCAAATTTGTTACTTAGCAAAATTTTGGCTATGGCAAATCCTTCCGGAGATTCATTGCAAAGAGTTTCTTATTGTTTTGCCAAAGGATTGAAGTGTAGGTTATCACTTTATCCTCATAATAATGTATTTTCAAATGGTGCACTCACAACAAGTGCTTCTAATGATGTTTCTTTGATCACTAGGGAAAATAAGTTGGAAGCTTTTCAACTTCTTTACCAAACAACACCATACATTACTTTTGGTTTCATGGCTGCAAATGAAGCTATATACCAAGGATCAAAAGGTAAAAGCTCAATACACATAATTGATTTAGAAATGGAGGATACTCTTCAATGGTCTTCCCTTATAAGGAACCTCGCTTCGAGGCCCGAGGGGCCTCCAAGGCTCAAGATAACAGGATTTAGTTCGAACGAAGAAAACAATGTTAAACTTCACACTAGCATGAATTTTCTTGTGGAGGAAGCAATCTCATTAGGAGTAGTCCTTGAATTTCGCATAATATCAGAGCCGGCAACACCTTCTTTTCTTACAATTGAGAACCTCAACCTGAGAGAAGGTGAATCATTATTTGTTAATAGCATCTTGAAATTGCACAAATATGTGAAAGAAAGTAGAGGTTATCTAAAAGCAATTCTTCAATCAATCAAGAAGCTAAGTCCAATTGCAGTCACAGTTGTAGAGCAAGACACAAACCACAATGGACCTTTTTTTCTAGGGAGGTTTTTGGAATCACTTCACTATTACTCAGCAATATTTGATTCTCTTGAAGCATGTATGCCAAGAAATAGTCCTATTAGGATGAAAATAGAGAAAGCACATTTTGCAGAAGAAATTTGTAACATTGTTGCTTATGAGGGTCCTGATAGAATGGAGAGACATGAAAGAGTAGATCAATGGAGAAGACAATTAGGAAGAGCAGGATTTCATGTAATGCCACTCAAATGTACAAGTCAAGCTAGAATGATGCTTTCTGTTTATGATTGTGATGGATATACATTGTCATGTGAAAAGGGATGTCTTTTACTTGGTTGGAAAGGAAGGCCTATTATGATGGCTTCTGCTTGGCAAGTGGCAAGTTTCTTATAA 1635 0.3786 MEDLNMWLSFYMNESDNHDFPIRRFCPARMEQDQGGECNDQETVLDHIELCTFDTTTTPCLLASSEVDDFVDSFINMEHYEDQESQENHHHHHHQSFDHFVVNEEDDDVDAYSIGYVPTTMEDEELEICENTTITMEEEVVEMNGTFGAIPQARASLGMNQGLDLVHTLLACAEAVGCRDNHQANLLLSKILAMANPSGDSLQRVSYCFAKGLKCRLSLYPHNNVFSNGALTTSASNDVSLITRENKLEAFQLLYQTTPYITFGFMAANEAIYQGSKGKSSIHIIDLEMEDTLQWSSLIRNLASRPEGPPRLKITGFSSNEENNVKLHTSMNFLVEEAISLGVVLEFRIISEPATPSFLTIENLNLREGESLFVNSILKLHKYVKESRGYLKAILQSIKKLSPIAVTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSPIRMKIEKAHFAEEICNIVAYEGPDRMERHERVDQWRRQLGRAGFHVMPLKCTSQARMMLSVYDCDGYTLSCEKGCLLLGWKGRPIMMASAWQVASFL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01724 544 ProSiteProfiles GRAS family profile. 156 539 IPR005202 -
Trre15g01724 544 Pfam GRAS domain family 165 539 IPR005202 -
Trre15g01724 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 123 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01724 Trre-Chr15 13775799 13777433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01724 162 540 GRAS Transcription Factor Family AT1G66350 37.143 6.18e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre15g01724 GRAS 5.3e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01724 - - mtr:25502341 917.146