Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01710 ATGGCTTTTCCTCTATGCAATCTCAATCTCAATCTTTCTCTTTTACCTCAATCCAAATCAAGATTCAAAGATAAACCCTTTCATCATACACTTTCATCTTCTTCAAAACCCATTTCTCAATATTCTTTATTCCTCACTTCATCTCCTTCTCCTTCACTCCAAAGTTCAAAAGTAGCTCAGGTGAATACACCATCATTAGCTACTCAAGATAAACAGAATCAGCATCAGAAAGATGAATTTTATCTCAATCTTGGTCTTGCTGTTAGGACCCTTCGTGAGGATATGCCCTTGATCTTCATCAAAGACCTTAATTATGATATTTATAGGGATGATGTAACATTCCTGGACCCTTTGAACACATTTACTGGTATTGAGAAGTATAAATTGATCTTCTGGGCATTGAGGTTTCATGGTAGAATTTTGTTTCGCGAGATTGGTTTGGATGTATACAGAATATGGCAGCCTTCAGAGAATGTGATATTGATTAGGTGGAACTTGAGGGGTGTGCCTCGAGTTCCATGGGAGGCTAAAGGTGAATTTCAGGGTACTTCGCGGTATAAATTGGACAGAAATGGGAAAATTTATGAACACAAAGTTGATAATTTGGCATTCAATTTTCCTCAGAAGATGGTGAAACCGGTTTCGGTTTTGGATTTGGTTACTGCTTGCCCTGCAAGTCCAAATCCAACATTTTTATGGGGTCCTTTGGATTCAAACTCTTGTTCGTGGATTGAGCTTTATCAGGCAGTTAAGGGCACATTGGATCAAGAAAGACAGTTGTTACCACAAGATGGTTTAGCTACATGTTCATAG 813 0.3838 MAFPLCNLNLNLSLLPQSKSRFKDKPFHHTLSSSSKPISQYSLFLTSSPSPSLQSSKVAQVNTPSLATQDKQNQHQKDEFYLNLGLAVRTLREDMPLIFIKDLNYDIYRDDVTFLDPLNTFTGIEKYKLIFWALRFHGRILFREIGLDVYRIWQPSENVILIRWNLRGVPRVPWEAKGEFQGTSRYKLDRNGKIYEHKVDNLAFNFPQKMVKPVSVLDLVTACPASPNPTFLWGPLDSNSCSWIELYQAVKGTLDQERQLLPQDGLATCS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01710 270 Pfam Uncharacterized conserved protein (DUF2358) 87 197 IPR018790 -
Trre15g01710 270 SUPERFAMILY NTF2-like 104 198 IPR032710 -
Trre15g01710 270 PANTHER RIKEN CDNA 2310061I04 GENE 30 235 IPR018790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01710 Trre-Chr15 13656461 13657690 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01710 - - gmx:100804596 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01710 15 13656461 13657690 Trre15g01710 15 13656461 13657690 ECH