Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01699 ATGATGAACTCTCATGATAGATCCATGTGTGTTCAAGGTGATTCAGGCCTTGTCCTCACCACCGATCCAAAACCACGACTTCGATGGACAGTCGAACTCCATGAACGTTTCGTCGATGCTGTTGCTCAACTTGGAGGGCCTGATAAAGCTACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGAGCAATCTATTAAGGATGTTTCAGCTTTTGAACTGCAGCGAAATACTGGCAACTCTTCTTCTATGACTGGCCGCAACATGAATGAGATGCAAATGGAGGTACACAGAAGATTGCATGAACAACTAGAGGTTCAAAAGCACCTTCAATTGAGGATTGAGGCTCAAGGAAAGTACATGCAAAACATATTGGAGAAAGCATATCACACACTTGCAGGAGAAAACATGGCAGCTGCAGCTACAAATTTCAAGGGTATTGGAACTCAAGGAATCCCTAACATGAAAGATTTTGTTTCACCTCTTAATAATTTTCCTCATTTTCAAGACCTTAACATTTGTGGTAGTGATGATCATGATGAACAACTTGAGAGGCCAACCATTGATGGATTTATGCCAAATATTAGTAATGAAAATTTGTTTGTTGAGAAGAAAATTAGGACTAATAACCCTTTTAATGGAAGTGGAAAAGGTCCATTAATTTGGAATGATAATAATAATAATGATCTTAGGCTTCATGATTTGGGAACAACTTCATCATGCATTAGTCCTCAAGATGTTCCTAATTTCAAAGGTGATGACTCATTGGATAGAGGTGATGATATTGAAAGTGATTCTATTAATGTTGAGATTTATGATACAAAGTTGAGTGAAAAGAATTTTGATTCATCTATCAAGCTTGGAATAACAACACCAATGATCAATGCTGTGGCAGCTGGTAGAAGCTCATCACCATTTGGTTGA 999 0.3864 MMNSHDRSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDVSAFELQRNTGNSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYHTLAGENMAAAATNFKGIGTQGIPNMKDFVSPLNNFPHFQDLNICGSDDHDEQLERPTIDGFMPNISNENLFVEKKIRTNNPFNGSGKGPLIWNDNNNNDLRLHDLGTTSSCISPQDVPNFKGDDSLDRGDDIESDSINVEIYDTKLSEKNFDSSIKLGITTPMINAVAAGRSSSPFG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01699 332 FunFam Myb family transcription factor 23 81 - -
Trre15g01699 332 Pfam MYB-CC type transfactor, LHEQLE motif 117 155 IPR025756 -
Trre15g01699 332 NCBIfam myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
Trre15g01699 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 175 IPR044848 GO:0003700
Trre15g01699 332 Gene3D - 23 81 - -
Trre15g01699 332 Pfam Myb-like DNA-binding domain 27 75 IPR001005 -
Trre15g01699 332 SUPERFAMILY Homeodomain-like 23 79 IPR009057 -
Trre15g01699 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01699 Trre-Chr15 13590694 13593360 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01699 6 266 G2-like Transcription Factor Family AT1G79430 59.567 9.70e-98 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre15g01699 Myb_DNA-binding 4.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01699 - - gmx:100796268 409.453