Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01698 ATGGAAAGAATGTTCCCTACAAAAAAGCCCTCAACTATGATGAACTCTCATGATAGATCCATGTGTGTTCAAGGTGATTCAGGCCTTGTCCTCACCACCGATCCAAAACCACGACTTCGATGGACAGTCGAACTCCATGAACGTTTCGTCGATGCTGTTGCTCAACTTGGAGGGCCTGATAAAGCTACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGAGCAATCTATTAAGGATGGTATGAGAGTTTCAGCTTTTGAACTGCAGCGAAATACTGGCAACTCTTCTTCTATGACTGGCCGCAACATGAATGAGATGCAAATGGAGGTACACAGAAGATTGCATGAACAACTAGAGGTTCAAAAGCACCTTCAATTGAGGATTGAGGCTCAAGGAAAGTACATGCAAAACATATTGGAGAAAGCATATCACACACTTGCAGGAGAAAACATGGCAGCTGCAGCTACAAATTTCAAGGGTATTGGAACTCAAGGAATCCCTAACATGAAAGATTTTGTTTCACCTCTTAATAATTTTCCTCATTTTCAAGACCTTAACATTTGTGGTAGTGATGATCATGATGAACAACTTGAGAGGCCAACCATTGATGGATTTATGCCAAATATTAGTAATGAAAATTTGTTTGTTGAGAAGAAAATTAGGACTAATAACCCTTTTAATGGAAGTGGAAAAGGTCCATTAATTTGGAATGATAATAATAATAATGATCTTAGGCTTCATGATTTGGGAACAACTTCATCATGCATTAGTCCTCAAGATGTTCCTAATTTCAAAGGTGATGACTCATTGGATAGAGGTGATGATATTGAAAGTGATTCTATTAATGTTGAGATTTATGATACAAAGTTGAGTGAAAAGAATTTTGATTCATCTATCAAGCTTGGAATAACAACACCAATGATCAATGCTGTGGCAGCTGGTAGAAGCTCATCACCATTTGGTTGA 1044 0.387 MERMFPTKKPSTMMNSHDRSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDGMRVSAFELQRNTGNSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYHTLAGENMAAAATNFKGIGTQGIPNMKDFVSPLNNFPHFQDLNICGSDDHDEQLERPTIDGFMPNISNENLFVEKKIRTNNPFNGSGKGPLIWNDNNNNDLRLHDLGTTSSCISPQDVPNFKGDDSLDRGDDIESDSINVEIYDTKLSEKNFDSSIKLGITTPMINAVAAGRSSSPFG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01698 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Trre15g01698 347 MobiDBLite consensus disorder prediction 1 20 - -
Trre15g01698 347 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Trre15g01698 347 NCBIfam myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
Trre15g01698 347 FunFam Myb family transcription factor 35 93 - -
Trre15g01698 347 Pfam MYB-CC type transfactor, LHEQLE motif 132 170 IPR025756 -
Trre15g01698 347 Gene3D - 35 93 - -
Trre15g01698 347 Pfam Myb-like DNA-binding domain 39 87 IPR001005 -
Trre15g01698 347 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 190 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01698 Trre-Chr15 13590694 13593396 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01698 4 281 G2-like Transcription Factor Family AT1G79430 59.932 2.96e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre15g01698 Myb_DNA-binding 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01698 - - gmx:100796268 438.728