Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01697 ATGGAAAGAATGTTCCCTACAAAAAAGCCCTCAACTATGATGAACTCTCATGATAGATCCATGTGTGTTCAAGGTGATTCAGGCCTTGTCCTCACCACCGATCCAAAACCACGACTTCGATGGACAGTCGAACTCCATGAACGTTTCGTCGATGCTGTTGCTCAACTTGGAGGGCCTGATAAAGCTACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCACCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGAGCAATCTATTAAGGATGTTTCAGCTTTTGAACTGCAGCGAAATACTGGCAACTCTTCTTCTATGACTGGCCGCAACATGAATGAGATGCAAATGGAGGTACACAGAAGATTGCATGAACAACTAGAGGTTCAAAAGCACCTTCAATTGAGGATTGAGGCTCAAGGAAAGTACATGCAAAACATATTGGAGAAAGCATATCACACACTTGCAGGAGAAAACATGGCAGCTGCAGCTACAAATTTCAAGGGTATTGGAACTCAAGGAATCCCTAACATGAAAGATTTTGTTTCACCTCTTAATAATTTTCCTCATTTTCAAGACCTTAACATTTGTGGTAGTGATGATCATGATGAACAACTTGAGAGGCCAACCATTGATGGATTTATGCCAAATATTAGTAATGAAAATTTGTTTGTTGAGAAGAAAATTAGGACTAATAACCCTTTTAATGGAAGTGGAAAAGGTCCATTAATTTGGAATGATAATAATAATAATGATCTTAGGCTTCATGATTTGGGAACAACTTCATCATGCATTAGTCCTCAAGATGTTCCTAATTTCAAAGGTGATGACTCATTGGATAGAGGTGATGATATTGAAAGTGATTCTATTAATGTTGAGATTTATGATACAAAGTTGAGTGAAAAGAATTTTGATTCATCTATCAAGCTTGGAATAACAACACCAATGATCAATGCTGTGGCAGCTGGTAGAAGCTCATCACCATTTGGTTGA 1035 0.3865 MERMFPTKKPSTMMNSHDRSMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNEQSIKDVSAFELQRNTGNSSSMTGRNMNEMQMEVHRRLHEQLEVQKHLQLRIEAQGKYMQNILEKAYHTLAGENMAAAATNFKGIGTQGIPNMKDFVSPLNNFPHFQDLNICGSDDHDEQLERPTIDGFMPNISNENLFVEKKIRTNNPFNGSGKGPLIWNDNNNNDLRLHDLGTTSSCISPQDVPNFKGDDSLDRGDDIESDSINVEIYDTKLSEKNFDSSIKLGITTPMINAVAAGRSSSPFG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01697 344 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 11 187 IPR044848 GO:0003700
Trre15g01697 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Trre15g01697 344 MobiDBLite consensus disorder prediction 1 20 - -
Trre15g01697 344 Gene3D - 35 93 - -
Trre15g01697 344 Pfam MYB-CC type transfactor, LHEQLE motif 129 167 IPR025756 -
Trre15g01697 344 NCBIfam myb-like DNA-binding domain, SHAQKYF class 36 91 IPR006447 GO:0003677
Trre15g01697 344 SUPERFAMILY Homeodomain-like 35 91 IPR009057 -
Trre15g01697 344 Pfam Myb-like DNA-binding domain 39 87 IPR001005 -
Trre15g01697 344 FunFam Myb family transcription factor 35 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01697 Trre-Chr15 13590694 13593396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01697 4 278 G2-like Transcription Factor Family AT1G79430 59.247 5.85e-102 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre15g01697 Myb_DNA-binding 4.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01697 - - gmx:100796268 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01697 15 13590694 13593396 Trre15g01697 15 13590694 13593396 ECH
Trre11g03494 11 47591440 47593509 Trre15g01697 15 13590694 13593396 PCT