Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01690 ATGGCTTCATTTAGCATCAAACTTTTGTTCTTGCAATATTTCTTGATGGTCATTGTTCTCATATTCACATTTGCTATCAAACAAAACGGTGTACGAGGATGGAATAATCAACAAAGAACACGTGTGCGCATTTTCAACGGTTTAGGGGGTGATGATTTTAATGTTCATTGTAAATCTAAAGACGATAATCTAGGATATCATGTGATTCACAAGAATGAATTTTATCAGTGGAAATTTCGCCCTAATTTTTTTCGATCAACTTTATTCTTTTGTCATATATCATGGGCAGGAGGTGAACTAACAGATGATTTTTACAAGCAAAAAAGGGATGCACGAGAACCAGGTAGAAGGTGTAGATTTTTTTGTGACTGGAATGTTACCAAAGATGGCGTACAAGGTTACAAAGAATTGCTTAGTAATTTGGGGGATTGGGTTGGTCGGAAGCCAGACTTATTTTTTAATTGGACAACAGGAAATTGA 480 0.3563 MASFSIKLLFLQYFLMVIVLIFTFAIKQNGVRGWNNQQRTRVRIFNGLGGDDFNVHCKSKDDNLGYHVIHKNEFYQWKFRPNFFRSTLFFCHISWAGGELTDDFYKQKRDAREPGRRCRFFCDWNVTKDGVQGYKELLSNLGDWVGRKPDLFFNWTTGN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01690 159 PANTHER - 38 132 IPR010264 -
Trre15g01690 159 Pfam Plant self-incompatibility protein S1 42 132 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01690 Trre-Chr15 13537175 13537654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01690 25 130 Carbohydrate Esterase AT3G16970 40.187 1.02e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01690 - - vun:114170110 118.242