Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01682 ATGGAATATTCTCTGATTTTCTCTGATCACCAATTGTTGCCATCATTTTGGTGTTTCATTCTCATATTTTTTGTTTCTACACTTCTCATCAAACATCAACGTAGTATCCAAAAATCTAAAAAACCTAAACTACCCCCTGGTCCTACACCATGGCCTATTGTAGGTAACCTACCTGAAATGCTTGCAAATAGACCAACATTTAGATGGATACAAAAAATGATGAATGACATGAATACAAAAATTGCATGCATACGTTTAGGTAATGTTCATGTCATTACAGTTAGTGATCCTGAAATTGCACGTGAAATATGTATTAAACAAGATGCAATTTTTGCTTCAAGACCAAGTAGTTGGTCAAATGAATATGTTACTACTGGATATTTAACAACAGCATTAACTCCATTTGGAGAACAATGGAAGAAAATTAAGAAATTAATTAGTAATGAATTAGTTTCACCTCTTAGACATCAATGGCTTCATGATAAGAGAGTGGATGAAGCTGATAATATTGTTAGGTATGTTTATAATCAATGTACTAAAATTGGTGGTGATGGAATTGTTAATGTTAGTGTTACTGCACAACATTATACAGGGAATGTTATTAGGAGGTTGCTTTTGAATACTAGGTATTTTGGAAATGGTAGTGAAGATTTTGGACCTGGTTTTGAGGAAGTTGAATATGTTGAAGCTGTTTTTACTGTTTTGCAATACCTTTTTGCTTTCTCTGTTTCTGATTTTATGCCATGTTTGAGGGGTTTGGATTTGGATGGTCATGAGAAGATTCTTAAGAAGGCTTGTAAGATCATGAAGAAACATCATGACCCTATAATTGAAGATAGAATTAAGGAATGGAAGAATGGGAAAAGGACTTATAAAGAAGATTTGCTTGATGTTCTCATCTCACTCAAAGATGCTGACAACAATGACCTTTTGACAGAGCAGGAGATTAAATCTAATGTTTTGGAGTTGACACTTGCAGCAGTTGATAATCCATCAAATGCAGTTGAATGGGGACTTGCTGAAATGATAAATCAACCTGAGCTACTTAAAAAAGCTATAGAAGAATTAGACAGTGTAGTTGGAAAAGAAAGATTGGTACAAGAATATGATTTTCCAAAGCTCAACTATGTGAAAGCTTGTGCTAGAGAAGCTTTTCGCCTTCATCCAATTTGTGATTTCAACCTTCCCCATGTCGCGATGAAAGACACAGTTGTTGCTGATTACTTTATACCAAAAGGTAGCCATGTCTATTTAATGAGACAAGGACTTGGCTTAAACCCTAATGTATGGGAAGAACCACTCATGTTCAAGCCGGAACGACATCTTAAGACAGATGGGTCAAATTTGAGTTTGACAGAATCGAGTTATAATTTGGTAACATTTAGCACCGGAAGGCGTGGGTGTTCGGGTGTCATGCTTGGATCTTCAATGACTATTATGCTATTTGCAAGGTTGCTTCATGGATTTACTTGGAGTGTGCCACCCAACCAATCTTGCATTGATCTTTCTGAGTCTCATGGAGGTACCACAAAAGCTAAGCCACTTGTGGCTGTGGCAAAGCCAAGGTTACCAAAAGAGGCTTATGGATTACACTAA 1596 0.3628 MEYSLIFSDHQLLPSFWCFILIFFVSTLLIKHQRSIQKSKKPKLPPGPTPWPIVGNLPEMLANRPTFRWIQKMMNDMNTKIACIRLGNVHVITVSDPEIAREICIKQDAIFASRPSSWSNEYVTTGYLTTALTPFGEQWKKIKKLISNELVSPLRHQWLHDKRVDEADNIVRYVYNQCTKIGGDGIVNVSVTAQHYTGNVIRRLLLNTRYFGNGSEDFGPGFEEVEYVEAVFTVLQYLFAFSVSDFMPCLRGLDLDGHEKILKKACKIMKKHHDPIIEDRIKEWKNGKRTYKEDLLDVLISLKDADNNDLLTEQEIKSNVLELTLAAVDNPSNAVEWGLAEMINQPELLKKAIEELDSVVGKERLVQEYDFPKLNYVKACAREAFRLHPICDFNLPHVAMKDTVVADYFIPKGSHVYLMRQGLGLNPNVWEEPLMFKPERHLKTDGSNLSLTESSYNLVTFSTGRRGCSGVMLGSSMTIMLFARLLHGFTWSVPPNQSCIDLSESHGGTTKAKPLVAVAKPRLPKEAYGLH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01682 531 ProSitePatterns EF-hand calcium-binding domain. 304 316 IPR018247 -
Trre15g01682 531 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 528 - -
Trre15g01682 531 FunFam Cytochrome P450 9 37 526 - -
Trre15g01682 531 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 SUPERFAMILY Cytochrome P450 45 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 Gene3D Cytochrome P450 29 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01682 531 Pfam Cytochrome P450 45 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01682 Trre-Chr15 13500752 13503576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01682 7 528 Cytochrome P450 AT4G39950 53.537 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01682 - K12153 gmx:100809902 665.225