Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01654 ATGCTGATATTAGTTCTAGGACTAATTTCAGCTACTTTGTTAGTGATTGTTGCAATTTATGGCTTTTGTTATATGAAAAGATCATCAAAACATGATATTGAAGACATAGAAAATTCAGAACAAAAGCATGAAGAGGTGAAAGAGGATTTGATCATTTTTCAAGGTGGAGAGGATTTGACAATATGTGATATATTGGATGCACCAGGGGAAGTAATTGGAAAATCAAATTATGGAACACTTTATAAGGCTTTGTTGCAAAGAAGTAACAAAGTGAGGTTGTTGAGGTTTTTGAGACCTGTTTGTACTTCAAGAGGTGAAGAATTGGATGAAATGATTTTGTTTCTTGGAAGATTAAAACATCCTAATTTGGTTCCTCTTTTGGGATTTTATACTGGACCAAGAGGTGAGAAGCTTCTTGTTCATCCATTTTACAGACATGGGAATCTTACTCAATTCATAAGAGATGGAAATGGTGAGAGTTATAAATGGTCAAATATATACACAATATCAATTGGTATAGCAAAAGGATTAGAACATCTTCACACAGAATATGAAAAGCCAATTATTCATGGAAACCTAAAGTCGAAAAATATCCTTTTAGATAGTTTCTATCAACCACACATCTCAGATTCAGGTCTTCATCTTTTGTTGAATCCAACTGCTGGCCAAGAAATGCTTGAAAGTTCATCTGCTCAAGGCTATAAAGCACCTGAACTCATCAAAATGAAGGATGCTAGCGAAGAAACCGATATATATAGCCTCGGTGTAGTCTTGCTTGAATTGCTTTCAGGAAAGGAACCTATCAATGAACATCCGACTCCTGATGAGGATTTCTATTTGCCGAATTTTATGAGAAATGCGGTTCTTGGACATAGAATTTCCGATTTATATCATCCCGCTATTCTTCACAGAAACGGCATGGACGATGAAATTCAAGTTACGGAAGAACGTGTTCTTAAATTTTTTCAACTTGCTATGGCTTGTTGTTCTCCTTCACCTTCAATTAGACCTAACATAAGGCAAGTTATTAGGAAACTTGAAGAAATTGTACACTAA 1056 0.3513 MLILVLGLISATLLVIVAIYGFCYMKRSSKHDIEDIENSEQKHEEVKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTSRGEELDEMILFLGRLKHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLTQFIRDGNGESYKWSNIYTISIGIAKGLEHLHTEYEKPIIHGNLKSKNILLDSFYQPHISDSGLHLLLNPTAGQEMLESSSAQGYKAPELIKMKDASEETDIYSLGVVLLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRISDLYHPAILHRNGMDDEIQVTEERVLKFFQLAMACCSPSPSIRPNIRQVIRKLEEIVH 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01654 351 Pfam Protein tyrosine and serine/threonine kinase 70 346 IPR001245 GO:0004672|GO:0006468
Trre15g01654 351 SUPERFAMILY Protein kinase-like (PK-like) 69 347 IPR011009 -
Trre15g01654 351 Gene3D Phosphorylase Kinase; domain 1 67 143 - -
Trre15g01654 351 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 37 349 - -
Trre15g01654 351 ProSiteProfiles Protein kinase domain profile. 66 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g01654 351 Gene3D Transferase(Phosphotransferase) domain 1 145 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01654 Trre-Chr15 13296849 13299109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01654 23 349 Carbohydrate Esterase AT5G61570 58.580 2.88e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre15g01654 PK_Tyr_Ser-Thr 2.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01654 - - gmx:100788898 583.948