Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01653 ATGGAAGGTGGAAACAGAGCCGAAGCTGAGCGGTGGCTTTACACCGCAAACAAGCTCCTTAGCGCACGTGATCTACACGGTGCACGTTCCTTCGCGATCCGTGCTAGAGAATCTGACCCTACTTTCGACGCATCTGAGCTTCTACTTGCTGTAATCGACACTCTCCTCGCCGGAGAAGCGAGAATCAACGATCACCACACCGATTGGTATGGAATTCTTCAAATCCTTCGTTACACAACAAATATCGACCACATCGCTAATCAGTATCGTCGTCTCGCTCTTTTACTCGACCCTAATCGGAACCCTTTCGCTTTCTCCGGTCACGCTTTTTCCCTTGTTCATGATGCTTGGTCTGTTCTATCTAATCCTGCTAAGAAGGCTATGTACGATAGTGACCTAAGATTGCATACTACTCCGCCGGTTCCGCCGCAGCCTCAGCCGCAGTCTCTTCCGCAGCATCAATCGGTGCTGCCTCAGTATCAGCAGCATCAGACACATAACCCTACGCCGAAGAAAAACCCTAGATCGAGGGAGGGTGTTGCTGAGCCGCCGATTCGGCAGAATCGGAACCCTAGCGAGTCTGCTGAGCCGACTCGGCAGACACGGATGGCGAGTGCTGCTGAAACGGACGGTAAGATTAGCTTCTGGACTTTGTGCCCTTACTGTTACGTTTATTATGAGTATCCGAAAGTGTATGAAGAGTGTACTTTAAGGTGCCAGAGTTGTAGGAGGGGGTTTCATGCGGTGGTGATACGTTCGCCGCCGTTGAATGAGATAGATTCTTCGTTTTGTACTTGGGGATTTTTTCCTTTAGGGTTTTCTGGTGATTCAAAAGATGTGAATGGTGCTTCTTCTAATTGGAACCCTATTGCACCTTTATTTCCCTCTTCCATGAAAGGATCTTCCAATAGGAAAAAGAATTGGGTTTACTATGATGAAGAGCAAACTGCTGCATTTATCGATATTTCTGATCCGAGTGATGATGATTCTGATGACGGGGATTGGAGGGGTGGTATTGGTAAGAGGAAAGGGGGGAAGAGGTCTGGGGTTAGTACTAGCAAAAAGATTAGGAAAGATTCTGGTAATGCTGGTGGCAGGGAAGCTGTGGAGAGACCTAGGAGGAGTGCTATTGGTGCTGCTGCAGGGAATGTGAATGAGAAGAATGTTGGGGCTGTTGACGCTGCTGGTGTGAAGGCAGATACTAATACTAGTAAGAAAGCTGTACCGAGTAGTTCTAGGAGAAGGGGTGCTGGAAATTTGGATTTGAATGTAGAGTTCAGTAATGATGTGGAGGAACCTTCCCGTGTAGTGCGTGCCCGTGAAGGAAATGCAACTGGCAATGCTGAGGATAATATTGAAGGGATTGGATTTTTTGAAGGCCTTGATGAGTTCCTCAGTAGTTTGCCAATTCTCAATGTGGTGGGAGATGATAAGGTTAAGGGCCATTAG 1449 0.4769 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGEARINDHHTDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSNPAKKAMYDSDLRLHTTPPVPPQPQPQSLPQHQSVLPQYQQHQTHNPTPKKNPRSREGVAEPPIRQNRNPSESAEPTRQTRMASAAETDGKISFWTLCPYCYVYYEYPKVYEECTLRCQSCRRGFHAVVIRSPPLNEIDSSFCTWGFFPLGFSGDSKDVNGASSNWNPIAPLFPSSMKGSSNRKKNWVYYDEEQTAAFIDISDPSDDDSDDGDWRGGIGKRKGGKRSGVSTSKKIRKDSGNAGGREAVERPRRSAIGAAAGNVNEKNVGAVDAAGVKADTNTSKKAVPSSSRRRGAGNLDLNVEFSNDVEEPSRVVRAREGNATGNAEDNIEGIGFFEGLDEFLSSLPILNVVGDDKVKGH 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01653 482 Gene3D DnaJ domain 57 139 IPR036869 -
Trre15g01653 482 MobiDBLite consensus disorder prediction 150 169 - -
Trre15g01653 482 MobiDBLite consensus disorder prediction 359 373 - -
Trre15g01653 482 MobiDBLite consensus disorder prediction 399 418 - -
Trre15g01653 482 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Trre15g01653 482 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Trre15g01653 482 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 362 - -
Trre15g01653 482 CDD DnaJ 68 122 IPR001623 -
Trre15g01653 482 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Trre15g01653 482 MobiDBLite consensus disorder prediction 187 206 - -
Trre15g01653 482 SMART dnaj_3 67 125 IPR001623 -
Trre15g01653 482 MobiDBLite consensus disorder prediction 321 376 - -
Trre15g01653 482 Pfam DnaJ domain 68 130 IPR001623 -
Trre15g01653 482 MobiDBLite consensus disorder prediction 134 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01653 Trre-Chr15 13286587 13288035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01653 8 481 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.700 5.62e-104 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01653 - - cam:101509006 686.411