Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01650 ATGGTTTTGATACAAAGTTCCGCACTTTCCTACCTATATTTCACATTATCTCTATTTCTCCTTGCAAGATTTCTCATCTCAACAAAAAAAATTAATAAAAAAAATCACTCCAAACTTCCACCAGGTCCTTCACCACTTCCCATAATAGGTAACCTTCTAAACCTAGGCAACAAACCACACCATTCTTTAGCTACCCTTTCCAACATTCATGGCCCAATAATGACACTAAAATTTGGCCAAATAACAACCATAGTAGTTTCCTCATCAGACATAGCAAAAGAAATTCTCCAAACACATGACAACTTACTCTCAAACCGAACCGTACCGGACGCACTATCCGTTCTCAATCATGACCAATATAGTTTATCTTTTATGCGTGTTTCGCCTCGTTGGCGTGACCTTAGAAAAATTTGCAATAACCAGTTGTTTTCGAGTAAAACACTCGATTTGAGCCAAGCGCTAAGGCGTAGGAAATTACAAGATCTTCTTGATGATATCGAAAAGTGTAGCGAAAATGAGGAAGCTGTGGATATTGGAAGAGTTGCTTTTAAGACGACGGTTAATTTGTTGTCGAATACTTTTTTCTCAGCGGATTTTGTGCATTCAGCCGAGGAGGCTGGAGAGTATAAGAAGAATGTTGTGAGTATATTGAAGGAAGTTGGAACGCCGAATTTGTCGGATTTTTTTCCTATGTTGAAGGTTTTTGATTTGCAAGGTATTAGAAGGCGTTCAGTTATTTCTGTTAATAAGGTTTTGAGTATTTTTAGGAGATTTGTTGGGGAAAGGTTGAAGTTGAGGGATGGTACTGGTTCTATTGAAAATGATGATGTGCTTGATGCTTTGCTTAATGGGAAGATTGAGATGGATAAAGATGAGATTGAACATTTGTTGCTGAACTTATTTGTTGCAGGAACAGACACAACAACTTACACACTAGAGTGGGCAATGGCGGAGTTAATGCACAATTCAGAAATCATGTCAAAAGTGAAAAATGAACTCGAACAAGCTGTTGGGAAAGGTATTCCAATACAAGAAACGGACATACCTAAACTACCTTACATGCAAGCAGTTATAAAAGAGACATTTCGGTTACATCCGGCTGTTCCTTTATTACTTCCTCGTAAAGCCGAAATCAATGTCCAAATTGGAGACTACATTATTCCAAAAGATGCACAAGTTTTGGTCAATGCTTGGGTTATTGGTAGAGATCCAAATAAATGGGATAATCCTAATGTTTTTTTACCAGAGAGATTTTTGGATTCTGAAATTGATGTTAAGGGACATCATTTTGAGCTTATTCCATTTGGATCTGGTAGAAGAATTTGTCCTGGTTTGCCTTTGGCTATTAGAATGTTGCCTTTGATGTTGGGATCTTTGATTAATTGCTTTAATTGGAAACTTGAAGATGGAATTAATGCTGATGACTTGAATAAGGAAGATGAATATGGGATTACTTTGGAAAAATCTCAACCGGTCAGAATTGTTCCAATCAAATTGACTAAGTAA 1506 0.3705 MVLIQSSALSYLYFTLSLFLLARFLISTKKINKKNHSKLPPGPSPLPIIGNLLNLGNKPHHSLATLSNIHGPIMTLKFGQITTIVVSSSDIAKEILQTHDNLLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNNQLFSSKTLDLSQALRRRKLQDLLDDIEKCSENEEAVDIGRVAFKTTVNLLSNTFFSADFVHSAEEAGEYKKNVVSILKEVGTPNLSDFFPMLKVFDLQGIRRRSVISVNKVLSIFRRFVGERLKLRDGTGSIENDDVLDALLNGKIEMDKDEIEHLLLNLFVAGTDTTTYTLEWAMAELMHNSEIMSKVKNELEQAVGKGIPIQETDIPKLPYMQAVIKETFRLHPAVPLLLPRKAEINVQIGDYIIPKDAQVLVNAWVIGRDPNKWDNPNVFLPERFLDSEIDVKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLINCFNWKLEDGINADDLNKEDEYGITLEKSQPVRIVPIKLTK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01650 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 17 498 - -
Trre15g01650 501 CDD CYP76-like 67 496 - -
Trre15g01650 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Trre15g01650 501 SUPERFAMILY Cytochrome P450 37 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 Pfam Cytochrome P450 40 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 Gene3D Cytochrome P450 24 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 FunFam Cytochrome P450 76C4 31 495 - -
Trre15g01650 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01650 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01650 Trre-Chr15 13264418 13267261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01650 1 498 Cytochrome P450 AT2G45550 43.137 5.97e-159 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01650 - - cave:132173603 569.696