Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01639 ATGATTCATGTCCCTATGTTACCACTTAAACCTTCACATTTTCAAGAGGGTGGTCTCTTATTATTGGAAGATGAGAAATCACTTGCAATGGAACTTGCAGCTTCTTCCATGTCTGAACTTGTTAAGATGTGTCAAATGAATGAACTGCTTTGGATTCGTAACAGTGAGAATGAAAGGGAAGTTAAGATGTTTCAAATGAATGAACTTATAACTAAATTACTCAAAATGCATGCAGAATTCCAAGTTCTTTCTCCACTGGTGTCAACTAGAGACTCATTTTCTTTGGTATTAAGGTCTTCTGGTTATGTCATTAAAGATATGCCAAATGGCTATTCAAGGGTACAAAATTAG 351 0.3533 MIHVPMLPLKPSHFQEGGLLLLEDEKSLAMELAASSMSELVKMCQMNELLWIRNSENEREVKMFQMNELITKLLKMHAEFQVLSPLVSTRDSFSLVLRSSGYVIKDMPNGYSRVQN 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01639 116 ProSiteProfiles START domain profile. 22 64 IPR002913 GO:0008289
Trre15g01639 116 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 18 62 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01639 Trre-Chr15 13110860 13112434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01639 19 68 Homeobox Transcription Factor Family AT5G46880 40.000 2.39e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01639 - - psat:127119778 96.6709