Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01621 ATGGAAACAAAAAACCCATCTGGGAATTCTTCAAAGTTTGAAACTTTCATGCATAATTCATCATCAACAAGAAGTTTTGGTAGGAATTCAATAAGAGAAGTGACTTTTGGTCACTCTGAGTCAAAACCTTCTGTGAGGTATGGTTCAAAGGGTGCTGATTCTGAAGCTTTTAGTATGTCTCAGAAAGAAATCAGTGATGAAGATGCTAGGTTAATTTATGTTGATGATCCTGTTAAGACAAATGAGAGGTTTGAATTTGCAGGGAATTCGGTTCGAACCGGAAAGTACTCTTTTATAACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTATTTCCTTATAATTGCTATTCTTAATCAGTTACCTCAACTAGCTGTTTTCGGAAGAGGTGTTTCGATTTTGCCATTGGCTTTTGTTCTTCTTGTTACTGCTGTGAAAGATGCATATGAGGATTGGAGGAGACATAGGTCTGATAAAGTTGAGAACAATAGGTTAGGATTGGTTTTGGTTAATGGTCAATTTATTGAGAAGAAATGGAAGGATATTAGAGTTGGTGAGATCATTAAAATCAATGCAAATGAACCGATTCCTTGTGATTTTGTTTTGTTGTCAACTAGTGACCCTACCGGTGTTGCTTATGTTCAGACACTTAATCTAGATGGTGAGTCTAATTTGAAGACTAGGTATGCCAAACAAGAGACTCAATTCAAGTTTCATGAAAAGGAGAGGTTTAATGGTTTGATTAAGTGTGAGAAACCGAATAGGAATATATATGGATTTCAGGCTACTATGGAGGTTGATGGAAAGAGATTGTCACTTGGTTCCTCGAATATTGTACTTAGAGGGTGTGAACTTAAGAACACTAATTGCGTGGTTGGTGTCGCGGTGTATTGTGGTCGTGAGACTAAAGCTATGCTCAACAACTCAGGAGCTCCGTCTAAGAGGAGTCGTCTCGAGACTCAAATGAACTCTGAGATCATCATGCTTTCTTTTTTCCTTGTAGCTTTGTGTATGGTCACTTCAGTTTGTGCTGCTGTTTGGTTGAAGCGAAACAAGAATGATTTGAATCTATTGCCTTATTATAGGAAATTGGATGTTTCAAAGGGAAAAGAGGAAAGTTATCAATATTATGGATGGGGAGCGGAAATGCTTTTCACGTTCCTCATGTCGGTTATAGTGTACCAGGTTATGATACCGATATCACTGTACATTTCTATGGAGCTTGTCCGTGTTGGTCAGGCTTACTTCATGATCAAAGATTCCAGATTGTACGACGAGGCAACAAATTCAAGATTTCAGTGTAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCGGACAAAACTGGTACTCTGACTGAGAACAAGATGGAGTTTCAATGCGCGAGTATTTGGGGTGTTGATTACAGTTCCGCAAAAGCCAACCTTGAGAATGAGCAACTTGAATACTCTCTTCAAGTGGAAGGAAAGGTCTTGAAGCCAAAAATGAAGGTGAAAGTTAATCAAGAGCTTTTGAGATTAACAAAAAGTGGATTTACAAACAAAGATGGAAAACGGATTTATGATTTCTTTCTTGCATTGGCAGCATGCAATACTATTGTGCCTCTTGTTATTGACACATCTGACCCTACAGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAACAAGCATTGACATATGCTGCCGCTGCCTACGGTTTTATGCTTATTGAACGTACCTCAGGTCACATAGTCATCGATATTCATGGAGAAAGACAAAGGTTCAATGTCTTGGGTTTACATGAATTTGATAGTGATCGGAAAAGGATGTCAGTTATATTGGGGTACAGCGACAATTCGGTTAAACTTTTTGTCAAAGGGGCAGATACATCCATGTTCAGTGTGATTAATAAATCATTGAACACAGACATAATACAAGCAACAGAAACCCATATTCACTCTTATTCATCGGTCGGTTTGAGGACGCTTGTTATTGGGATGCGGGACTTGAATGCTTCAGAGTTTGATCAATGGCACTTTGCCTTTGAGGCAGCAAGTACTTCTATGATCGGTAGGGCTGCTTTGCTTCGCAAAGTTGCTGCCAATGTTGAGAACAATGTTTGCATATTAGGCGCTACCGCTATTGAAGATAAATTGCAGCAAGGTGTGCCAGAATCTATCGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTATTGACTGGTGACAAACAGGAAACGGCCATATCAATAGGCTACTCCTCAAGGCTACTAACAAGCGGCATGACTCAATTTAGAATTAAGAGCAATAACAGAGAGTCGTGTCGAAGACGTTTACAAGATGCACTTCTCATGTCTAGGAAAAATATGGCTGCACCTGAGGTTGGCAACTATTTTGAAAGAAGTTCCGATGTTGTTTCAACTCCGATGGCTTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGACAATGAACTTGAAGAAGAGCTCTTTGAACTTGCACAAAGATGTTCCGTTGTTCTTTGTTGTCGAGTGGCTCCATTGCAAAAGGCTGGGATTGTCTCTCTTGTGAAGAAAAGGACGGCTGACATGACTTTAGCCATTGGAGATGGTGCCAATGATGTATCAATGATCCAAATGGCTGATGTTGGGGTCGGCATCAGTGGTCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGACAGTTTAGGTTTTTAGTACCTCTCTTATTTATACACGGACACTGGAATTACCAACGACTAGGCTACATGGTGTTATACAATTTTTACAGAAATGCCGTCTTTGTCTTAATTCTATTTTGGTATGTGCTTTTCACTGCCTTCACTTTGACAACTGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATCTACACTGCCGTGCCAACTATTGTTGTTGGTATTCTTGACAAGGATCTTAGTAAAAGGACTCTTCTTGATAATCCTCAACTTTATGGGGCTGGACAAAGACAGAAAGCCTACAACAAAAAATTGTTTTGGTTGACAATGGCTGATACGTTATGGCAAAGTATTGTTGTCTTCTTTGCTCCTCTCTTTGCGTATTGGGGAAGCACCGTAGATATAGCAAGCATAGGGGATCTTTGGACCCTTTCGGTAGTTATTTTGGTCAATTTGCACTTGGCCATGGATGTAATCAGGTGGACTTGGATTACTCATGCATCCATTTGGGGTTCTATCATTTCGACTTTCATATGTGTCATGATTATTGATGCATTACCATCACTCCGTGGTTACTGGGCTATCTTTGATGCTGCAGGCACGGCATTGTTCTGGTTATGTTTGCTTGGAATACTAATAGCAGCATTACTTCCACGATTTGTTGTAAAATTTGTATATCAATATTATTCGCCCGATGATATTCAAATTTCAAGAGAAGTTGAGAAGGCTAGGAATCTAAGGATCAATGGAGATGCACAGATAGAAATGTTTCACATCTCAAATCCACAAAGATAA 3528 0.3929 METKNPSGNSSKFETFMHNSSSTRSFGRNSIREVTFGHSESKPSVRYGSKGADSEAFSMSQKEISDEDARLIYVDDPVKTNERFEFAGNSVRTGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLGLVLVNGQFIEKKWKDIRVGEIIKINANEPIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFNGLIKCEKPNRNIYGFQATMEVDGKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEIIMLSFFLVALCMVTSVCAAVWLKRNKNDLNLLPYYRKLDVSKGKEESYQYYGWGAEMLFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKANLENEQLEYSLQVEGKVLKPKMKVKVNQELLRLTKSGFTNKDGKRIYDFFLALAACNTIVPLVIDTSDPTVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGYSDNSVKLFVKGADTSMFSVINKSLNTDIIQATETHIHSYSSVGLRTLVIGMRDLNASEFDQWHFAFEAASTSMIGRAALLRKVAANVENNVCILGATAIEDKLQQGVPESIESLRKAGIKVWVLTGDKQETAISIGYSSRLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNMAAPEVGNYFERSSDVVSTPMALIIDGTSLVYILDNELEEELFELAQRCSVVLCCRVAPLQKAGIVSLVKKRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFIHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVGILDKDLSKRTLLDNPQLYGAGQRQKAYNKKLFWLTMADTLWQSIVVFFAPLFAYWGSTVDIASIGDLWTLSVVILVNLHLAMDVIRWTWITHASIWGSIISTFICVMIIDALPSLRGYWAIFDAAGTALFWLCLLGILIAALLPRFVVKFVYQYYSPDDIQISREVEKARNLRINGDAQIEMFHISNPQR 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01621 1175 FunFam Phospholipid-transporting ATPase 712 915 - -
Trre15g01621 1175 FunFam Phospholipid-transporting ATPase 560 693 - -
Trre15g01621 1175 Gene3D - 146 313 - -
Trre15g01621 1175 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 1142 IPR023298 -
Trre15g01621 1175 SUPERFAMILY HAD-like 451 930 IPR036412 -
Trre15g01621 1175 NCBIfam HAD-IC family P-type ATPase 846 961 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre15g01621 1175 Pfam Cation transport ATPase (P-type) 564 639 - -
Trre15g01621 1175 SFLD Haloacid Dehalogenase 440 926 - -
Trre15g01621 1175 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 462 728 IPR023299 GO:0000166
Trre15g01621 1175 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 65 1153 - -
Trre15g01621 1175 SUPERFAMILY Calcium ATPase, transduction domain A 171 310 IPR008250 -
Trre15g01621 1175 Pfam Phospholipid-translocating ATPase N-terminal 72 137 IPR032631 -
Trre15g01621 1175 CDD P-type_ATPase_APLT_Dnf-like 88 1035 - -
Trre15g01621 1175 Pfam E1-E2 ATPase 174 413 - -
Trre15g01621 1175 Gene3D - 557 690 IPR023299 GO:0000166
Trre15g01621 1175 Pfam Phospholipid-translocating P-type ATPase C-terminal 903 1142 IPR032630 -
Trre15g01621 1175 Gene3D - 712 915 IPR023214 -
Trre15g01621 1175 PRINTS P-type cation-transporting ATPase superfamily signature 862 874 - -
Trre15g01621 1175 PRINTS P-type cation-transporting ATPase superfamily signature 739 749 - -
Trre15g01621 1175 PRINTS P-type cation-transporting ATPase superfamily signature 456 470 - -
Trre15g01621 1175 NCBIfam phospholipid-translocating P-type ATPase 86 1150 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Trre15g01621 1175 SFLD p-type atpase 440 926 IPR044492 -
Trre15g01621 1175 FunFam Phospholipid-transporting ATPase 144 313 - -
Trre15g01621 1175 MobiDBLite consensus disorder prediction 1 28 - -
Trre15g01621 1175 ProSitePatterns E1-E2 ATPases phosphorylation site. 458 464 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01621 Trre-Chr15 12973706 12979024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01621 21 1175 Primary Pumps ATPases AT5G04930 69.204 0.0 1689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01621 K14802 - gmx:100784988 1917.12