Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01598 ATGGCAGAAGTTATCACCAACATTCCCTCCGATTCCCTCGACAAATCCCCAACCTCCTCCGCCCCTCCTCCACCACCACCACCACCACCACCTCCTCCCTCCTCCGTCGCCGATTCCGATCTCCCTCCACCTTCTCATCCACCTCCACACTCCTCCTATCGCCGTAGAGACTACCGCAGAGACGATAGAGATTTCGATCGTCCTCCTAATCGCCGTGATTACTATGACCGTAACATGTCTCCGCCGCCAAGGGATAGAGATAGAGACTTCAAGCGTAGGCGTAGTCCCAGTCCTCCATATCGTGATCGCCGATATTCTCCACCGCCGCGGCGATCGCCTCCACATTACAATTACAAGCGCTCCAGGAGAGGTGGCAGTCCTCGTGGTGGTTATGGACCTGATGATAGGTTAGCGTCTGGATATGATCATTACGGTGGTTATGATAGGGGTGGAAGAGGTGGTTATGATAGGGGTGGAAGAGGCGGTAATGATAGGGGTGGAAGAGGTGGTTATGCTGATGACAGGTCTTATGGTAGGTTTGGAAATCGTTCAGCAGCAGGATATCAAAATGGGATCTCTGATATGGAATACAATCGTGCTTATGCAGACTTGCCAATTGCTGGTGCACAAAGAGAAGGGTTGATGTCCTACAAACAATTCATTCAGGAACTCGAGGATGATATACTACCAACTGAAGCAGAACGTAGGTATCAAGAATACAGAACAGAGTACATTTCTACCCAAAAGAGAGCTTATTTCAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTCACTGTCATTGAAAGGAGGAACGAAAGTGCTCGCCAGCTGGCAAAGAATTTTTTGCTTGATTTGCAGAGTGGAACATTAGATATAAATCCAGGTTTAAGTGCCTCTTCATCCAGCAAATCAGGACAAGCTAGCGAGCCAAATTCAGAGGAGGAAGCGGATGGTAAACGAAGAAGACATGAAAGGGGTTCTAATAAACAAAGTGATTTCTCAGCTGCTCCAAAGACTCATCCTATCAGTTCTGAACCTAAAAGAATACAAGCAGATGTTCAACAGGCTCAATCTCTTGTTCACAAGCTTGACACTGAAAAGGGGATTGGAGACAATATTCTATGCAGCAGTGATCACAGTAAAGCTGATGATAAGTCTCATAGTGGATCTGCGGGCCCCACAGTCATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGTTGAGCTTTTGGACACACTTATTACATATTTGTGGCGGATTCATGGTGTAGATTACTATGGCATGATTGAGACTAATGACGCTAAGGGTTTTAGACATGTGAGGCCAGAAAGAACAGGGCATGCAGAAACTGGTAAATCAGGGTCTGAATGGGAGAAGAAACTTGATTCATTTTGGCAGGGAAGGTTGAATGGTCAGGATCCATTGGAAGTAATGGCTGCTAAGGAGAAAATAGAAGCTGCAGCGGTTGAAGTGTTGGATCCATATGTTAGAAAAATCAGGGATGAAAAATATGGATGGAAGTATGGTTGTGGAGCTAAAGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGTATAAACATCTGAAGCTAAAACACCCAGAGCTTGCTCTTGAACAAACTTCAAAACTCCGTGAGGATCTCTATACTCAAAATTATATGAATGATCCAGATGCTCCTGGTGGAAAGCCTGTCATGCAGCAACCTCAGAAGGACAACAAGCCTTTAAATCGAAGGTTAGGTATGGAGGGCCGATTGAGAGATGATCGTGGTAATCGTCGAGACCATGAACGGAATGACAGAATAAATGACGGAGATAGACCTGATTCCCCATCCCGTGAAAGGCAGTCTAAAGCACTTGAGATGGGAAACCACGATGAAACAATGTATGACGCTTATGCAGGGCCTGGGGTTCCTCCTTTTTCCTCGGATATGCCTCCGCCAGTATTGATGCCTGTACCTGGTGCTGGGCCATTAGGACCTTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAAATGTTAAGAGAACAAGGAGGGCCATCTTCATTTGATGCCTCTGGAAGAAATATGCTGTCTGGCCCTCCTATAGGAGGACCGACACCAATAATTGCTGTTCCTCCTGCTTTTAGACCAGATCCTCGGAAGATGCGAAGTTATCGAGATTTGGATGCTCCAGACGACGAGGTCACCGTGATAGATTATCGAAGTTTGTAG 2244 0.459 MAEVITNIPSDSLDKSPTSSAPPPPPPPPPPPPSSVADSDLPPPSHPPPHSSYRRRDYRRDDRDFDRPPNRRDYYDRNMSPPPRDRDRDFKRRRSPSPPYRDRRYSPPPRRSPPHYNYKRSRRGGSPRGGYGPDDRLASGYDHYGGYDRGGRGGYDRGGRGGNDRGGRGGYADDRSYGRFGNRSAAGYQNGISDMEYNRAYADLPIAGAQREGLMSYKQFIQELEDDILPTEAERRYQEYRTEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNESARQLAKNFLLDLQSGTLDINPGLSASSSSKSGQASEPNSEEEADGKRRRHERGSNKQSDFSAAPKTHPISSEPKRIQADVQQAQSLVHKLDTEKGIGDNILCSSDHSKADDKSHSGSAGPTVIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNDAKGFRHVRPERTGHAETGKSGSEWEKKLDSFWQGRLNGQDPLEVMAAKEKIEAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELALEQTSKLREDLYTQNYMNDPDAPGGKPVMQQPQKDNKPLNRRLGMEGRLRDDRGNRRDHERNDRINDGDRPDSPSRERQSKALEMGNHDETMYDAYAGPGVPPFSSDMPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSFDASGRNMLSGPPIGGPTPIIAVPPAFRPDPRKMRSYRDLDAPDDEVTVIDYRSL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01598 747 Pfam SERRATE/Ars2, N-terminal domain 218 299 IPR021933 -
Trre15g01598 747 MobiDBLite consensus disorder prediction 562 626 - -
Trre15g01598 747 MobiDBLite consensus disorder prediction 50 109 - -
Trre15g01598 747 MobiDBLite consensus disorder prediction 149 172 - -
Trre15g01598 747 MobiDBLite consensus disorder prediction 586 626 - -
Trre15g01598 747 PANTHER ARSENITE-RESISTANCE PROTEIN 2 54 745 IPR039727 GO:0006397
Trre15g01598 747 ProSitePatterns Zinc finger C2H2 type domain signature. 520 543 IPR013087 -
Trre15g01598 747 MobiDBLite consensus disorder prediction 18 49 - -
Trre15g01598 747 MobiDBLite consensus disorder prediction 1 181 - -
Trre15g01598 747 Pfam Arsenite-resistance protein 2 460 647 IPR007042 -
Trre15g01598 747 MobiDBLite consensus disorder prediction 688 732 - -
Trre15g01598 747 MobiDBLite consensus disorder prediction 301 317 - -
Trre15g01598 747 MobiDBLite consensus disorder prediction 318 337 - -
Trre15g01598 747 MobiDBLite consensus disorder prediction 301 366 - -
Trre15g01598 747 SUPERFAMILY Formin homology 2 domain (FH2 domain) 23 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01598 Trre-Chr15 12820657 12828435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01598 68 747 C2H2 Transcription Factor Family AT2G27100 61.451 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01598 K27103 - gmx:100817569 984.941