Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01596 ATGGGGTCTCAAGGAGGAGGAGATGGTAGTGGAAAATGGTCACAACTCCACTCTCTTGTGCGGCAAAATTCGATGTACAGTCTCACACTTGATGAAGTTCAAAATCAATTAGGTGACTTAGGGAAGCCACTAAGTAGTATGAACTTAGACGAGCTTCTTAAAAATGTATGGACTGTTGAGGTGAACCAGTCCACGAGTACGGATAATGAAGGGAAAACACAAGCTAGTCAAGCTTCTCTACAACGTCAAGCTAGTCTGTCGTTAAAAGCTGCGTTAAGCATGAAGACTGTGGATGAGGTTTGGAGAGATATCCAACAAACGAAAGACAATGAGGAGAAGAAGTCACGCGAGAGACAACCTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGCATCTTCTGATAAAACCAATACAGATACTATAGCTGGGATTGATTCCAATGCAGCAGTATCACCATTTCCTCCACAAGGTCAGTGGATACAGTATCCGCAACCGCAACCACAATATCAGCATCTACAACAAAGTTCAATGGGGATTTATATGCCTAGCCAGGGTATCGCACAACCGTTACACTTGGGTGCTGGTGCTTCAATGGAGATTCCGTTTGCAGATAGTCATATGCCACTGGCTGCACCACTTATGGGAACAGTGTTGGATACACAGATATCTGGAAGAAAAAGGAGCACTCCAGAGGATATGGTGGAGAAGACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCGGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACTAACGAATTGGAGATTAAAGTTTCGCGCCTGGAAGAGGAAAATGAAATGCTCAGGAAACGAAAGGAGCTAGAGAATATGTTGCCGTGTGTACCAATCACCGAACCTAAATATCAGCTACGCCGAATCGCATCTTCTCCATTCTAA 960 0.4427 MGSQGGGDGSGKWSQLHSLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEVNQSTSTDNEGKTQASQASLQRQASLSLKAALSMKTVDEVWRDIQQTKDNEEKKSRERQPTLGEMTLEDFLVKAGIVAEASSDKTNTDTIAGIDSNAAVSPFPPQGQWIQYPQPQPQYQHLQQSSMGIYMPSQGIAQPLHLGAGASMEIPFADSHMPLAAPLMGTVLDTQISGRKRSTPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKRKELENMLPCVPITEPKYQLRRIASSPF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01596 319 Pfam bZIP transcription factor 249 293 IPR004827 GO:0003700|GO:0006355
Trre15g01596 319 Coils Coil 265 299 - -
Trre15g01596 319 SUPERFAMILY Leucine zipper domain 249 294 IPR046347 GO:0003700|GO:0006355
Trre15g01596 319 SMART brlzneu 245 317 IPR004827 GO:0003700|GO:0006355
Trre15g01596 319 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 247 299 - -
Trre15g01596 319 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 314 IPR043452 GO:0003700|GO:0045893
Trre15g01596 319 CDD bZIP_plant_BZIP46 249 295 - -
Trre15g01596 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Trre15g01596 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 292 IPR004827 GO:0003700|GO:0006355
Trre15g01596 319 Gene3D - 247 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01596 Trre-Chr15 12809645 12811794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01596 18 319 bZIP Transcription Factor Family AT3G56850 52.500 3.98e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre15g01596 bZIP_1 2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01596 K14432 - gmx:100101875 417.157