Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01595 ATGGGGATCCAAACAATGGGGTCTCAAGGAGGAGGAGATGGTAGTGGAAAATGGTCACAACTCCACTCTCTTGTGCGGCAAAATTCGATGTACAGTCTCACACTTGATGAAGTTCAAAATCAATTAGGTGACTTAGGGAAGCCACTAAGTAGTATGAACTTAGACGAGCTTCTTAAAAATGTATGGACTGTTGAGGTGAACCAGTCCACGAGTACGGATAATGAAGGGAAAACACAAGCTAGTCAAGCTTCTCTACAACGTCAAGCTAGTCTGTCGTTAAAAGCTGCGTTAAGCATGAAGACTGTGGATGAGGTTTGGAGAGATATCCAACAAACGAAAGACAATGAGGAGAAGAAGTCACGCGAGAGACAACCTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGCATCTTCTGATAAAACCAATACAGATACTATAGCTGGGATTGATTCCAATGCAGCAGTATCACCATTTCCTCCACAAGGTCAGTGGATACAGTATCCGCAACCGCAACCACAATATCAGCATCTACAACAAAGTTCAATGGGGATTTATATGCCTAGCCAGGGTATCGCACAACCGTTACACTTGGGTGCTGGTGCTTCAATGGAGATTCCGTTTGCAGATAGTCATATGCCACTGGCTGCACCACTTATGGGAACAGTGTTGGATACACAGATATCTGGAAGAAAAAGGAGCACTCCAGAGGATATGGTGGAGAAGACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCGGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACTAACGAATTGGAGATTAAAGTTTCGCGCCTGGAAGAGGAAAATGAAATGCTCAGGAAACGAAAGGAGCTAGAGAATATGTTGCCGTGTGTACCAATCACCGAACCTAAATATCAGCTACGCCGAATCGCATCTTCTCCATTCTAA 975 0.4431 MGIQTMGSQGGGDGSGKWSQLHSLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEVNQSTSTDNEGKTQASQASLQRQASLSLKAALSMKTVDEVWRDIQQTKDNEEKKSRERQPTLGEMTLEDFLVKAGIVAEASSDKTNTDTIAGIDSNAAVSPFPPQGQWIQYPQPQPQYQHLQQSSMGIYMPSQGIAQPLHLGAGASMEIPFADSHMPLAAPLMGTVLDTQISGRKRSTPEDMVEKTVERRQKRMIKNRESAARSRARKQAYTNELEIKVSRLEEENEMLRKRKELENMLPCVPITEPKYQLRRIASSPF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01595 324 SUPERFAMILY Leucine zipper domain 254 299 IPR046347 GO:0003700|GO:0006355
Trre15g01595 324 CDD bZIP_plant_BZIP46 254 300 - -
Trre15g01595 324 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 252 304 - -
Trre15g01595 324 Gene3D - 252 305 - -
Trre15g01595 324 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 25 319 IPR043452 GO:0003700|GO:0045893
Trre15g01595 324 Pfam bZIP transcription factor 254 298 IPR004827 GO:0003700|GO:0006355
Trre15g01595 324 Coils Coil 270 304 - -
Trre15g01595 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 297 IPR004827 GO:0003700|GO:0006355
Trre15g01595 324 SMART brlzneu 250 322 IPR004827 GO:0003700|GO:0006355
Trre15g01595 324 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01595 Trre-Chr15 12809630 12811794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01595 23 324 bZIP Transcription Factor Family AT3G56850 52.500 3.57e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre15g01595 bZIP_1 2.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01595 K14432 - gmx:100101875 417.157