Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01578 ATGGAGTGGCTTCTTCAATTCCTTCATCTCTTCTTCTTAGCTTCTCTTCTTATCTTGAACACAACAATTGCAGATCAAATTACTAAGCCTTATGTTGTTTATATGGGAAATTCATCACCAAATAAAATTGGATTAGATGAACAAATACCAGAATCAGTTCATTTAGAGTTACTATCATCAATCATTCCAAGTAGGGATGTCAATTTGCATCCTGAAGAAAGTGAGAGGATAGAACTGATTCACCATTACAATCATGCCTTTAGTGGATTCTCTGCCATGCTTACAGAGAATGAAGCTTCTGCATTGTCTGGCCACGATGGTGTGGTGTCAGTGTTCCAAGATCCAATACTTGAATTGCATACAACGAGGTCTTGGGATTTCTTAGATTCAGATTTGGGAATGAAGCCTCCACCTGCCACTACTCACAAAACTTCATCAACTCATGATATAATCATTGCTCTCATTGACACAGGGATATGGCCAGAGTCACCAAGTTTCAAAGATGATGGTATAGGGAAGATTCCTTCAAAATGGAAAGGAATTTGCATGGAGGGTCATGATTTCAAGAAATCTAATTGCAACAGGAAATTGATAGGTGCAAGATACTATAATACACAAGATACATTAAGTAGCAACAAGACTCATATTGAAGGAACAAAAGGTTCACCAAGAGATTCTATTGGACATGGAACTCACACTGCATCAACAGCAGCCGGTGTATTTGTCGACAATGCAAGTTATTTTGGTTTAGGAAAAGGAACAGCTAGAGGTGGTTCACCTTCTACTAGGATAGCTGCTTATAAAACATGTTCAGAAGATGGTTGTTCAGGTTCAACAATATTAAAGGCTATGGATGATGCTATTAAAGATGGTGTAGATATAATCTCAATCTCTATTGGACTTAGTTCACTGATGCAATCAGATTATTTGAATGATCCAATAGCTATTGGAGCATTTCATGCAGAACAAAGAGGGGTTGTGGTTGTGTGTTCAGCAGGGAATGATGGTCCTGATCCTTATACTGTTGTGAATACGGCACCGTGGATATTTACTGTTGCAGCTTCTAATATTGATAGGAACTTTCAGTCAACTATTGTCCTTGGAAATGGGAAAAGTTTCAAAGGTAATGGAATTAACTTCTCAAACCTTACTCACTCAACATTGTATTCTCTTGTCTTTGGAGAGAAAGTTGCTGCCAAATTCGCGCCAATATCAGAAGCTAGGAATTGTTATCCTGGATCACTAGATTACAACAAAGTAGCAGGCAGAATTGTTGTTTGTGTTGACGATGATCCGAATATTTCAAGGAAAACCAAGAAGCTAGTTTTACAAGATGCAAGAGCCATGGGAATGATATTCGTCAGTGAGGACAATAAGGATGTTTCCTTTGATGCAGGTGCATTTCCCTTCACAGAGATTGGAAATCTTGAAGGGCACCAAATCCTTCAGTATATAAACTCTACCAAGAAACCAACTGCTACAATTCTTCCAACAATAGAAGTTCCTAGATATCGGCCGGCACCAATTGTTGCCTCTTTCTCATCTAGAGGTCCTTCAAGCCTCACAGAAAACATTCTCAAGCCTGATGTCATGGCTCCAGGAGTTTCCATTTTGGCTGCCATGGTTCCTAAGAGTGATGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCCTTATTTGGAATAAAATCTGGTACATCTATGGCTTGTCCTCATGTGACAGGTGCTGCAGCATTCATCAAATCAGTACATGGAAGTTGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGCTACAACCTACAATAACATGAGGAAGCCGGTGACAAATAGCTCAAACTACATTGCCAACCCACATGAAATGGGAGTTGGAGAAATCAATCCACTCAAAGCTCTCAACCCTGGTTTAGTCTTCGAAACAGATATCGAAGACCACATTCGATTCCTTTGTTATTATGGCTATTCAAACAAAACCATAAGATCAGTGTCTAAGACTAATGTAACTTGCCCAAGAACTTCTCATGATCTTATATCCAACATTAACTATCCATCAATCTCTATACAAACACTTAAAAGAAATCAGAAAGTAAGAATAATCACAAGAACAGTGACCAATGTGGGAACCTTAAATGCTACATATGTTGCAAAAGTGCATGCACCTGAAGGATTTATTGTTAAGTGA 2187 0.3882 MEWLLQFLHLFFLASLLILNTTIADQITKPYVVYMGNSSPNKIGLDEQIPESVHLELLSSIIPSRDVNLHPEESERIELIHHYNHAFSGFSAMLTENEASALSGHDGVVSVFQDPILELHTTRSWDFLDSDLGMKPPPATTHKTSSTHDIIIALIDTGIWPESPSFKDDGIGKIPSKWKGICMEGHDFKKSNCNRKLIGARYYNTQDTLSSNKTHIEGTKGSPRDSIGHGTHTASTAAGVFVDNASYFGLGKGTARGGSPSTRIAAYKTCSEDGCSGSTILKAMDDAIKDGVDIISISIGLSSLMQSDYLNDPIAIGAFHAEQRGVVVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQSTIVLGNGKSFKGNGINFSNLTHSTLYSLVFGEKVAAKFAPISEARNCYPGSLDYNKVAGRIVVCVDDDPNISRKTKKLVLQDARAMGMIFVSEDNKDVSFDAGAFPFTEIGNLEGHQILQYINSTKKPTATILPTIEVPRYRPAPIVASFSSRGPSSLTENILKPDVMAPGVSILAAMVPKSDEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKSVHGSWSPSMIKSALMTTATTYNNMRKPVTNSSNYIANPHEMGVGEINPLKALNPGLVFETDIEDHIRFLCYYGYSNKTIRSVSKTNVTCPRTSHDLISNINYPSISIQTLKRNQKVRIITRTVTNVGTLNATYVAKVHAPEGFIVK 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01578 728 Pfam Subtilase family 149 605 IPR000209 GO:0006508|GO:0008236
Trre15g01578 728 Pfam Peptidase inhibitor I9 31 120 IPR010259 -
Trre15g01578 728 CDD Peptidases_S8_3 117 601 IPR034197 -
Trre15g01578 728 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 120 IPR037045 -
Trre15g01578 728 SUPERFAMILY Subtilisin-like 119 638 IPR036852 GO:0004252|GO:0006508
Trre15g01578 728 FunFam subtilisin-like protease SBT1.5 358 501 - -
Trre15g01578 728 Gene3D Peptidase S8/S53 domain 149 646 IPR036852 GO:0004252|GO:0006508
Trre15g01578 728 Pfam Fibronectin type-III domain 681 727 IPR041469 -
Trre15g01578 728 Gene3D - 358 502 - -
Trre15g01578 728 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 722 IPR045051 -
Trre15g01578 728 Gene3D - 651 728 - -
Trre15g01578 728 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Trre15g01578 728 PRINTS Subtilisin serine protease family (S8) signature 564 580 IPR015500 -
Trre15g01578 728 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Trre15g01578 728 CDD PA_subtilisin_like 364 495 - -
Trre15g01578 728 FunFam Subtilisin-like protease SBT1.5 149 378 - -
Trre15g01578 728 ProSitePatterns Serine proteases, subtilase family, serine active site. 565 575 IPR023828 -
Trre15g01578 728 ProSiteProfiles Serine proteases, subtilase domain profile. 124 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01578 Trre-Chr15 12655579 12665577 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01578 31 728 Subtilisin-like Serine Gene Family AT1G20150 44.134 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01578 K25898 - gmx:100809885 1133.24