Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01571 ATGGCTGGAGCTGGACGAGGTTTATTTAACTATGATGTGTTCTTCAGCTTCAGAGGTCCAGACACACGTCTGGGTTTTACAGGAAATCTGTACAGTGCTCTGAAGCAAAGAGGGATCCACTGTTTCTTTGATGCTGTGGAGATTCAAAAAGGAGATAAAATCACTCCATCACTTGTAAATGCAATTCAAAAATCAAAGATTGCCATCATTGTGCTTTCCAAAACATATGCTTTTTCTTCCTTTTGTTTAGATGAACTTTGCACTATTGTAGACTGCTTTGATGCGAAAAAGGGTCAGGTTATTTTACCTGTGTTTTTTAACGTTGAACCTTCTGATGTGCGATACTGCACAGGAAGTTATAGCGAAGGATTGGCATATCTTAGGGAGTGGTTCGACGAGAAGAAACTCGAGAAATGGAGGACTACTCTAAACGAAGTATCTCACATCGATGGCTACCCTTTCAAGAACGGGACTGGATATGAATATCAATTCAATTTGAGGATCATCAAAGAAGTCTTCCTCAAGATTAATCGTACACTTTTACATGTAGCAAATTATCCAGTTGGATTGGAATCTCGAGTGGATAAAGTAATCTCGCTTCTAAATGTTGGATCTGATGATGTGGTCCACTTCGTGGGTATACATGGTATCGGGGGAATAGGTAAAAGTACTATTGCTCGAAGTGTATATAATTCCATCAATCACCACTTTAATGGTCTCTGTTGCTTTCTCGAAGATGTGAGGGAGAATTTGCACAAATATAGCTTAGCACATCTCCAACAGACAGTTCTTTCTGAGATACTTGGAAACAACGTTCAGTTGAGTTCTGTTAGCCATGGGAAGCAATTAATAGAGCAAAGGCTTTTCAATAAAAAGGTTCTTTTGGTTCTTGATGATGTTGACAAAATAGAGCAGTTGCATGCTATTGCTGGAGCACCTAATTGGTTTGGTTCTGGTAGCGTGGTAATCATAACAACTCGGGACAAGAGAATTCTATTACAGCATGTGGTTGAAAGTAAAATATATGAGGTGGAGGAGTTGAATGAAAAAGAAGCTCGTGAATTGCTTAGTTTGAATGCTTTCAAAACTGACAAAGTTGATCCAAAGTACACCAGCATTTTAAACCGTGCATTGTGTTACACTTCTATGCTCCCGCTGGCCTTGGTAGTAGTAGGTTCCAACTTGGTTGATAAAGGGGAAGAAGATTGCAGACTTATATTAGATCGGTATGACAGAATCCCAGTTAAAGAGATCCAAGACATACTAAGAGTAAGCTTTGATTCCTTGGATAAAGAAGACAAGGATGTTTTTCTTGACATTGCTTGTTGCTTCGGAGGATATAAATTGTCAGATGTTGAAGATATACTATATGCTCACCATGGTTCATCAATTAAACTTAGTATTGAGCTGTTGAATGAAAGATCTCTCATTAAGATTGATGATGGTCTTGTGACATTACATGAATTGATACAAACCATGGGTAGAGAAATTGCGGGACAAGAATCAAAAGAGCCCAATGAACGTAGTAGGTTATGGAACATTGAAGATGTAGTCGAAGTTTTAGAAGAAAACAAGGGAACTAGCAAAATTCATATGTTAATTCTGGATTTTCCCAAAGATGGACACGTGAAAGGATCCAAAGGGGCAGAAGTAAATTGGGACGGAGAGGCCTTAAGGGAAATGAAAAACCTCAAAACTCTTATTATTAGAAATGGTAATTTTTGCAAAGGCCCCACACATCTTCCAAATAGTTTAAGAGTTTTGAAATGGCCTGGATATGCTTTACCATCTTTACCATGTAATTTTCATCCAAAGAAACTGCGCATACTCGAGTTACCTGAGAGCTTCTTACAGCCATGCGAACCAATCCAGGCATTTGCATATTTGACAATTTTGGATTTTAGCTTCAGTGAAGATATAACTGAGATACCTGATGTATCTGGTCTTCAAAATTTAGAAAAGTTGTCATTTAAACATTGTGAGAAGTTAACTAAAATTCATGACTCAGTTGGATGTTTGGGAAGTCTTAAAATATTGGATGCTTCTAGTTGCAAGAGTCTTAATACTTTTCCACCCATCATATTAACCTCTCTAGAACAACTCAATCTTTCACATTGCTCAAAGCTTGAGAGTTTTCCAGAAATATTGGGAAAGATGGAAAATATAACAGAACTTCATATAATGGAGAGTCCAATAAAAGAATTGCCATTTTCAATTCAAAACCTTACTCGGCTTCGAAAGTTGGAACTGCAAACCTGTGGAATGGTTCAGTTACCTATCTGTGTTGTCATGTTGCCAGAACTAATTTTGATGCATGTTTCGAATTGTGAGGAGCTGTCGTTATCTGAAAACAACAAAAGTAAAGAAATGGTGTCAAAGTCTTCAAATATGGATTGTCTTATTCTCACAGACTGCAATATATCCAATGACTTTCTTCCAATCGGTCTTAACATTTTTTCCAACGTGAAAGATATAAACCTATCGGGGAATAGTTTCACGACTATTGATGCATGGATCAAAGAATGTCACTTTTTGAGGAACCTTAAGCTGGATAGTTGTCGTCATCTACAAAAAATTAGCGGGATTCCAAAGAAATTAGAAACATTTTCTGTGAAAGGGTGCACATCCTTGAAATGCTTGGACCTCAGAGTTCTTCCTGCATGCACTGCAGAATCTTGTTCTTTGAAGGAACTTATTTTGGATGGTTGTCTGTATCTTCATGATATTACTGGGCTTCCGCAAAACTTGGATCTGTTCTCTGCAATAAGCTGCACAGCATTGAATTCCCAGAGTATAAGCATGTTATTGAATCAGGAAGGTGTACAGGCTGGAAACAAGATGTTTGTTTTCCCAAGGAAAAAACTTCCAGAGTGGTTCAGACCTCGTATAAGTGTAAAAAAGGTTCACACCTCGAGAGTGGTTAGAAAACAAGAAATCGCAGGGTCATTTTCTTTCTGGTTTCGCAACAAATTTCCAACAATTTCTCTATGTCTTGTTATCGGACTGGGGAATGAGCAACCTATCACAGTCAAGTTTCGCCCCCGAGTATTCATCAATGGCAATGAGCAGCGCATTAGCTGTCAGAAAGTTTACGAGTTCATGATAGCTACTGATCATGTATTTCTGCTGATGTTTGAAGATAATGGGGACATGGTGTTTTCAGATAACCAGTGGAATCGTGTGGAGGTTTCATTTGCTGATCATATTACAAACAACGAGGTACCAATCAGACAGGGAGCCAGATATAGCGGAATACATGTATTTGAACAATCAACCGATATGGGGGATTTCCAATTCACCAACCCTCCACAAACAGAGATAAACATGAATTTGAATCCACATCCAATGACGGGAGCACACCAAAGAATCACAGCGGAGAGACCCCAAAAAGAGCAGACAAAGGTGTTACCTTCCCCCATTCTCTCGTCGTCCCTACTTCGACCTCCAATTGCTGAGGTCAAAAAGGGTTTAGGCCCTAAACCAATACTTCCACTTACGAGGTCTTTGGAGGATGTCACAGCAGAAACTTCTAAGCGGCTTCGAGAGGAGGAATTTCATCCTACTACAATTCCAAATGACCCTCCTGTCATTCAAAGTTGTTGTGAGGAATCTTCTGAACATGATGAATATGAAGAATATTCTCCCAAGACTGAATCTGAAGGTTCTGACTCAGATGATCCCTTTGACCGTGTTGATAGAATACTTGGTATTAGTGCCAAGGAAACCATATCTTCTGCGTCAAGTTCTGGAGATGCTTCACTTGGATCAATTATAGAGGCTATTAACTCCTTGGAGCCATTAATGGTTAAGGACTTGTCTGAAGTCTCTTCTGATCCTGATGTACATTCTGAAATTCATCAACTGTTGGATCTATTGAGTGCAAGTTACCACCCAAAGGTGTCGGTAGAGGTGGAGGAAGCTATTGAGGAGTTCAAGAAAAAGACCTTGTTATCATTGCAAGAATTCCAATCCACCGTTGAGCCTGTAAACAAATTGAAGCATTTTCAAATGCATCGGGCTAGAATTCAGCAGGAGACTGTGGAAGGGAAGGATCGAAGGAAGTACCTCAAAAACTCAATAAAGGATGTATCTTCGGCCATCAAAACTGAAAATAGTAGGAAGAAGGATTTAGAGACAGAAATATCAACTTTAAGAATGCAACTATCTACCAAAGAAGGGGACCTTAAACAACTTGTGGTGAATCTCAAGAATCAGGAGGAATCACTCTCAACCTATTCTACAAGTTATGCTTCTGTCAATGAGAAAGCTCGAGCACTATCTATAGAAGCTGAAGGTCTACGTGTGGCAAGCGGCATGGTTGAGCTGGATGGCGAAGCCGCTGAATTGAAGCAGAATACGCTGAAGTCAACCTGGTCCATTGACCTGACCAACCAGTTGTATGAGATTAAAAATAGCATTATTGACCTTTTATGA 4434 0.3933 MAGAGRGLFNYDVFFSFRGPDTRLGFTGNLYSALKQRGIHCFFDAVEIQKGDKITPSLVNAIQKSKIAIIVLSKTYAFSSFCLDELCTIVDCFDAKKGQVILPVFFNVEPSDVRYCTGSYSEGLAYLREWFDEKKLEKWRTTLNEVSHIDGYPFKNGTGYEYQFNLRIIKEVFLKINRTLLHVANYPVGLESRVDKVISLLNVGSDDVVHFVGIHGIGGIGKSTIARSVYNSINHHFNGLCCFLEDVRENLHKYSLAHLQQTVLSEILGNNVQLSSVSHGKQLIEQRLFNKKVLLVLDDVDKIEQLHAIAGAPNWFGSGSVVIITTRDKRILLQHVVESKIYEVEELNEKEARELLSLNAFKTDKVDPKYTSILNRALCYTSMLPLALVVVGSNLVDKGEEDCRLILDRYDRIPVKEIQDILRVSFDSLDKEDKDVFLDIACCFGGYKLSDVEDILYAHHGSSIKLSIELLNERSLIKIDDGLVTLHELIQTMGREIAGQESKEPNERSRLWNIEDVVEVLEENKGTSKIHMLILDFPKDGHVKGSKGAEVNWDGEALREMKNLKTLIIRNGNFCKGPTHLPNSLRVLKWPGYALPSLPCNFHPKKLRILELPESFLQPCEPIQAFAYLTILDFSFSEDITEIPDVSGLQNLEKLSFKHCEKLTKIHDSVGCLGSLKILDASSCKSLNTFPPIILTSLEQLNLSHCSKLESFPEILGKMENITELHIMESPIKELPFSIQNLTRLRKLELQTCGMVQLPICVVMLPELILMHVSNCEELSLSENNKSKEMVSKSSNMDCLILTDCNISNDFLPIGLNIFSNVKDINLSGNSFTTIDAWIKECHFLRNLKLDSCRHLQKISGIPKKLETFSVKGCTSLKCLDLRVLPACTAESCSLKELILDGCLYLHDITGLPQNLDLFSAISCTALNSQSISMLLNQEGVQAGNKMFVFPRKKLPEWFRPRISVKKVHTSRVVRKQEIAGSFSFWFRNKFPTISLCLVIGLGNEQPITVKFRPRVFINGNEQRISCQKVYEFMIATDHVFLLMFEDNGDMVFSDNQWNRVEVSFADHITNNEVPIRQGARYSGIHVFEQSTDMGDFQFTNPPQTEINMNLNPHPMTGAHQRITAERPQKEQTKVLPSPILSSSLLRPPIAEVKKGLGPKPILPLTRSLEDVTAETSKRLREEEFHPTTIPNDPPVIQSCCEESSEHDEYEEYSPKTESEGSDSDDPFDRVDRILGISAKETISSASSSGDASLGSIIEAINSLEPLMVKDLSEVSSDPDVHSEIHQLLDLLSASYHPKVSVEVEEAIEEFKKKTLLSLQEFQSTVEPVNKLKHFQMHRARIQQETVEGKDRRKYLKNSIKDVSSAIKTENSRKKDLETEISTLRMQLSTKEGDLKQLVVNLKNQEESLSTYSTSYASVNEKARALSIEAEGLRVASGMVELDGEAAELKQNTLKSTWSIDLTNQLYEIKNSIIDLL 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01571 1477 SUPERFAMILY L domain-like 553 909 - -
Trre15g01571 1477 Gene3D Ribonuclease Inhibitor 716 932 IPR032675 -
Trre15g01571 1477 Gene3D Ribonuclease Inhibitor 554 714 IPR032675 -
Trre15g01571 1477 Pfam TIR domain 10 160 IPR000157 GO:0007165
Trre15g01571 1477 PRINTS Disease resistance protein signature 381 395 - -
Trre15g01571 1477 PRINTS Disease resistance protein signature 287 301 - -
Trre15g01571 1477 PRINTS Disease resistance protein signature 671 687 - -
Trre15g01571 1477 PRINTS Disease resistance protein signature 211 226 - -
Trre15g01571 1477 Coils Coil 1360 1394 - -
Trre15g01571 1477 SUPERFAMILY "Winged helix" DNA-binding domain 416 522 IPR036390 -
Trre15g01571 1477 Gene3D - 8 179 IPR035897 -
Trre15g01571 1477 SMART till_3 10 149 IPR000157 GO:0007165
Trre15g01571 1477 Pfam NB-ARC domain 191 398 IPR002182 GO:0043531
Trre15g01571 1477 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 759 IPR044974 GO:0006952
Trre15g01571 1477 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 152 IPR035897 -
Trre15g01571 1477 Gene3D - 180 341 IPR027417 -
Trre15g01571 1477 MobiDBLite consensus disorder prediction 1112 1140 - -
Trre15g01571 1477 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
Trre15g01571 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 440 IPR027417 -
Trre15g01571 1477 MobiDBLite consensus disorder prediction 1209 1228 - -
Trre15g01571 1477 MobiDBLite consensus disorder prediction 1174 1228 - -
Trre15g01571 1477 Gene3D - 346 430 IPR042197 -
Trre15g01571 1477 MobiDBLite consensus disorder prediction 1174 1188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01571 Trre-Chr15 12563184 12569369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01571 10 804 WRKY Transcription Factor Family AT4G12020 28.726 1.35e-67 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01571 - - mtr:25501119 1738.01