Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01560 ATGGAGGAGTTTGTGTTTCCAACAGCAACAACAATAATCATATGTGTTCTTACAGTTATACTTGCTGTGATTCCATGGAATCTGTTCAACAAGTTATGGTTGAAGCCAAAGAGGTTGGAAAAACTTCTCATATCTCAAGGTCTTCAAGGTGACTCATATAAGCTTTCACTATTAATGGATAACTCAAAGCAAAATCATATGATGAAGTTGCAACAAGAAGCTATATCTAAATCTATTGGTCTTTCCAAACATGCTGCACCATCTATTTTCTCACCTCTTCATCAAACTGTACACAAATATGGAAAGAATTCCTTTTTATGGGTAGGTACAATACCAAATGTTATCATCACAGACCCTGAGCAAATTAAGCAAGTCTTTAACAAGAATGAGGACTTTCCCAAACCAAAGCTAAGTTCCATTGCCAAGTATTTGAGCATTGGTCTTTTAAATCTTGAGGGTGAGAAATGGGTTAAACATCGAAAGATCATCAGTCCGGCATTCCATATTGAAAAATTGAAAGTCATGCTGCCTGCATTTTTTCACAGTTGCAATGAAATGATAAGCAAATGGAAGGGGTTGATGTCACCAGATGGAACATGTGAGATTGATGTTTGGCCTTTTCTTCAGAATTTGACATGTGATGCAATTTCTAGAACAGCATTTGGAAGCAGCTATGAAGAAGGCACAAAAATGTTTGAACTTCTGAAGAAGCAAGGATATCTTTTGATGACAGCACGACACACAAACATTCCGTTATGGCGGCTTCTACCAACAACTACCAAGAGGAAGATGGAAGAAATTGAAACAGAAATCCATGATTCGCTTGAGGGAATCATTAAAAAACGAGAAAAAGCATTGAAGAACGGTGAAAATACCGATGACGATTTATTAGGCATACTTTTGGAATCAAATTATGCCGAAAAACAAGGACATGGAAATAGTAAAAGTATTGGAATGACCATAAAAGAAGTGATAGATGAATGCAAATTTTTTTATCTAGCGGGGCAAGAGACCACCTCAAGTTGGCTGGTTTGGACAATGGTGTTATTAGGCAGGTATCCTGAATGGCAAGGACACGCAAGGCAGGAAGTTTTGCAAGTTTTTGGGAACCAAAATCCAAACTTTGAAGGATTAAGTCAACTTAAAATTGTAACCATGATTTTGTATGAGGTACTAAGGTTATATCCACCTGCAGTTTACTTCAACCGAGCTGTTCAAAAGGATTTGAAAGTCGGAAACCTTTTTCTGCCCGCAGGAACACAAGTTTCCCTACCGATAATTTTGATTCACCAAGATAATGATATATGGGGTGATGATGCAAAGGAGTTCAAACCCGAAAGGTTTGCTGAAGGGATTGCAAAGGCAACAAAAGGCCAAGTTTGTTATTTCCCTTTTGGATGGGGTCCTAGAATTTGTCTTGGACAAAACTTTGCCTTATTAGAAGCAAAAATAGTGATATCATTGTTGCTGCAGAATTTCTCATTTGAGCTTTCTCCTACTTATGCACATGTTCCTAACATGATGCTTACTTTGCAACCAAAAAATGGAGCAAGCATCATTTTGCATAAATTGTAG 1575 0.3752 MEEFVFPTATTIIICVLTVILAVIPWNLFNKLWLKPKRLEKLLISQGLQGDSYKLSLLMDNSKQNHMMKLQQEAISKSIGLSKHAAPSIFSPLHQTVHKYGKNSFLWVGTIPNVIITDPEQIKQVFNKNEDFPKPKLSSIAKYLSIGLLNLEGEKWVKHRKIISPAFHIEKLKVMLPAFFHSCNEMISKWKGLMSPDGTCEIDVWPFLQNLTCDAISRTAFGSSYEEGTKMFELLKKQGYLLMTARHTNIPLWRLLPTTTKRKMEEIETEIHDSLEGIIKKREKALKNGENTDDDLLGILLESNYAEKQGHGNSKSIGMTIKEVIDECKFFYLAGQETTSSWLVWTMVLLGRYPEWQGHARQEVLQVFGNQNPNFEGLSQLKIVTMILYEVLRLYPPAVYFNRAVQKDLKVGNLFLPAGTQVSLPIILIHQDNDIWGDDAKEFKPERFAEGIAKATKGQVCYFPFGWGPRICLGQNFALLEAKIVISLLLQNFSFELSPTYAHVPNMMLTLQPKNGASIILHKL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01560 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Trre15g01560 524 Pfam Cytochrome P450 89 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 SUPERFAMILY Cytochrome P450 88 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 Gene3D Cytochrome P450 76 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 CDD CYP72 90 520 - -
Trre15g01560 524 FunFam Cytochrome P450 734A1 33 524 - -
Trre15g01560 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 516 - -
Trre15g01560 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g01560 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01560 Trre-Chr15 12494422 12497252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01560 11 524 Cytochrome P450 AT3G14690 50.289 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01560 - K17873 ag:BAL45207 806.208