Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01528 ATGGCGATTGAAAAATCAAATTCCTTTGAGAATTGTAAACATTACATGGCTATGATATGTTTACAATTTGGCTATGCTGGTATGAATATTATCACTAAGGTTTCACTCAACCAAGGAATGAGTCACTATGTGCTCGTCGTTTATCGTCACGCTTTCGCAACTGCTTGTATAGCTCCATTTGCATTTGTTCTTGAAAGGAAAGGTCAACCAAAGATAACATTCCGAATTTTCGTGCAAATTTTCATCTTAGCTCTTCTCGGGCCAGTGATTGATCAAAATTTCTATTATGCTGGGTTGAAGCTGACATCACCAACTTTTTCTTGTGCAATGAGTAACGTGCTTCCTGCCATGACTTTTGTGATGGCAGTTATATGCAGGATGGAGAAGATAAACATAAAGCAAGTAAGGTGCCAAGCAAAGATATTTGGAACACTATTGACAGTAGCTGGTGCAATGCTAATGACATTATACAAAGGTCCTATTATGGAGTTGTTTTGGGTCAAACATAGACATCCTCAAAATGAAACACATGAAAGTGAAACAACCACCACAGGATCTTCTGAAAAAGATTGGATATTAGGATGCACTTTCCTTATCCTTGCCACCTTTGCTTGGGCTTGTCTCTTTGTTTTACAAGCAAAAGTTATAGAGACGTACAAGCATCATCAGCTAAGCCTAACTTCACTTATAGTCTTCATTGGTACTCTTCAAGCTATTGCTGTTACTTTTGTTGCTGAGCACAATCTTTCTGTTTGGAGAATTGGTTGGGATATGAGTTTACTTGCTGCTGCTTATGCTGGGATTGTGACCTCAAGCTTGGCATACTATGTGCAAGGGCTGGTGATTAGGAAGAAAGGGCCTGTCTTTGCAACTGCCTTTAGCCCACTTATGATGATCATTGTTGCTGTCATGGGCTCCTTTATCCTAGCAGAAGATATTTATTTTGGAGGTGTGATAGGTGCCATCTTGATTGTGATAGGCTTATATTCTGTTCTTTGGGGAAAGCACAAGGAAGAAATAGAGAAAAAAGTAGATGACATTCCTTTGCCTATAAAGGGTACTCAAATGAGTGGAAATTCAGGGCCAGTGATTGATGACACAGATCAAGTAAAACATGGTCAAGTTGGAGATACTAACAATATGCTTTCTTCACTTGCAATAAGTATGCCTACTAGAGAGCCTACTAATAATGTTAACCAACAATAA 1206 0.3881 MAIEKSNSFENCKHYMAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATACIAPFAFVLERKGQPKITFRIFVQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVICRMEKINIKQVRCQAKIFGTLLTVAGAMLMTLYKGPIMELFWVKHRHPQNETHESETTTTGSSEKDWILGCTFLILATFAWACLFVLQAKVIETYKHHQLSLTSLIVFIGTLQAIAVTFVAEHNLSVWRIGWDMSLLAAAYAGIVTSSLAYYVQGLVIRKKGPVFATAFSPLMMIIVAVMGSFILAEDIYFGGVIGAILIVIGLYSVLWGKHKEEIEKKVDDIPLPIKGTQMSGNSGPVIDDTDQVKHGQVGDTNNMLSSLAISMPTREPTNNVNQQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01528 401 Pfam EamA-like transporter family 16 155 IPR000620 GO:0016020
Trre15g01528 401 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Trre15g01528 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
Trre15g01528 401 PANTHER WAT1-RELATED PROTEIN 14 343 IPR030184 GO:0016020|GO:0022857
Trre15g01528 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01528 Trre-Chr15 12140346 12143619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01528 1 393 Nodulin-like Gene Family AT5G07050 64.677 8.97e-179 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01528 - - gmx:100804390 599.742