Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01527 ATGGACAGAAGGTATTATTACAAAAATTTGCTACCTTTTGTGGTTCTTGTTGCAAATGAATGCATCATAACAGGAGTAAACACTTTGTTCAAAGCAGCCACTTTGCAAGGAATGAGTAAATATGTCTTTGTTACTTATTCTTATGCTTTTGCAACTATCTTTTTCTTTCCCGGATATCTTTACCATATAAGATCAAGAGTGGTTCCTCAACTCAGTTTCTCCATCTTATCTAAAATTGCTATTCTTGGAGTCATTGGAGGTTCAGCTCAGATTATGGGTTATGCTGGCATCAGTTACAGTTCTCCTACACTTTCCTCTGCAATTGGAAATCTCATTCCTGCCTTCACTTTCATGTTAGCTGCCATTTGCAGGATGGAAAAGATAGCTATAAAAACTAGAACTACACAAGCTAAGGTTTGGGGAAGCATTATATCAATATCAGGTGGATTTATAGTGACTTTCTACAAAGGAAAATCAATTACCAATATTGCTCATAATTCCTCTTCCTTTCATCTTCAACACTCAAATGGCATTGTTACATCAGTTGATATAAATTGGGTCATTGGTGGCCTTTTGCTGACATTATCCAATATACTAATTACCATATGGTTCATTGTTCAGGCGGAAATCATGAAGGAGATTCCAGATGAACTAACATCAGTCTTCTTTCACAACTTATTTGCAGCCATTTTGGCTTTATGTACTAACATATCACTGATCTCTATTGTCTGCACTGCAATATTTGGCAAGTTCCTGGGTAATGCAATATATGCTTGGGCAATACACTTAAAAGGTCCTGTATATGTAACAATGTTCAAGCCACTCTCAATTGTTATTGCAGTTGTCATGGGTATGGTGTTCCTTGGTGATACTCTTCATATTGGAAGTATAGTTGGAGCCACAATAATCTCAATAGGTCTTTATGTTGTATTATGGGGAAAAGCATTAGAAGAGATAGAGGAAGATGTTGGTACCTTGGAGTCACCATCTACAGAGAATGCACCTCTGTTGCAAAGTTATAGAACTGATCAAACTTTTGAAAAGAAAACAGATAGAAATGTTAAAAAGCACGGTCATCAAATCGAGATTCAATCGTGA 1098 0.3643 MDRRYYYKNLLPFVVLVANECIITGVNTLFKAATLQGMSKYVFVTYSYAFATIFFFPGYLYHIRSRVVPQLSFSILSKIAILGVIGGSAQIMGYAGISYSSPTLSSAIGNLIPAFTFMLAAICRMEKIAIKTRTTQAKVWGSIISISGGFIVTFYKGKSITNIAHNSSSFHLQHSNGIVTSVDINWVIGGLLLTLSNILITIWFIVQAEIMKEIPDELTSVFFHNLFAAILALCTNISLISIVCTAIFGKFLGNAIYAWAIHLKGPVYVTMFKPLSIVIAVVMGMVFLGDTLHIGSIVGATIISIGLYVVLWGKALEEIEEDVGTLESPSTENAPLLQSYRTDQTFEKKTDRNVKKHGHQIEIQS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01527 365 Pfam EamA-like transporter family 21 131 IPR000620 GO:0016020
Trre15g01527 365 Pfam EamA-like transporter family 189 311 IPR000620 GO:0016020
Trre15g01527 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 314 - -
Trre15g01527 365 PANTHER WAT1-RELATED PROTEIN 11 325 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01527 Trre-Chr15 12113945 12122991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01527 1 344 Nodulin-like Gene Family AT3G28050 45.161 1.16e-107 318