Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01526 ATGGACAGAAGATCAAGAGTGGTTCCTCAACTCAGTTTCTCCATCTTATCTAAAATTGCTATTCTTGGAGTCATTGGAGGTTCAGCTCAGATTATGGGTTATGCTGGCATCAGTTACAGTTCTCCTACACTTTCCTCTGCAATTGGAAATCTCATTCCTGCCTTCACTTTCATGTTAGCTGCCATTTGCAGGATGGAAAAGATAGCTATAAAAACTAGAACTACACAAGCTAAGGTTTGGGGAAGCATTATATCAATATCAGGTGGATTTATAGTGACTTTCTACAAAGGAAAATCAATTACCAATATTGCTCATAATTCCTCTTCCTTTCATCTTCAACACTCAAATGGCATTGTTACATCAGTTGATATAAATTGGGTCATTGGTGGCCTTTTGCTGACATTATCCAATATACTAATTACCATATGGTTCATTGTTCAGGCGGAAATCATGAAGGAGATTCCAGATGAACTAACATCAGTCTTCTTTCACAACTTATTTGCAGCCATTTTGGCTTTATGTACTAACATATCACTGATCTCTATTGTCTGCACTGCAATATTTGGCAAGTTCCTGGGTAATGCAATATATGCTTGGGCAATACACTTAAAAGGTCCTGTATATGTAACAATGTTCAAGCCACTCTCAATTGTTATTGCAGTTGTCATGGGTATGGTGTTCCTTGGTGATACTCTTCATATTGGAAGTATAGTTGGAGCCACAATAATCTCAATAGGTCTTTATGTTGTATTATGGGGAAAAGCATTAGAAGAGATAGAGGAAGATGTTGGTACCTTGGAGTCACCATCTACAGAGAATGCACCTCTGTTGCAAAGTTATAGAACTGATCAAACTTTTGAAAAGAAAACAGATAGAAATGTTAAAAAGCACGGTCATCAAATCGAGATTCAATCGTGA 918 0.3725 MDRRSRVVPQLSFSILSKIAILGVIGGSAQIMGYAGISYSSPTLSSAIGNLIPAFTFMLAAICRMEKIAIKTRTTQAKVWGSIISISGGFIVTFYKGKSITNIAHNSSSFHLQHSNGIVTSVDINWVIGGLLLTLSNILITIWFIVQAEIMKEIPDELTSVFFHNLFAAILALCTNISLISIVCTAIFGKFLGNAIYAWAIHLKGPVYVTMFKPLSIVIAVVMGMVFLGDTLHIGSIVGATIISIGLYVVLWGKALEEIEEDVGTLESPSTENAPLLQSYRTDQTFEKKTDRNVKKHGHQIEIQS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01526 305 Pfam EamA-like transporter family 129 251 IPR000620 GO:0016020
Trre15g01526 305 SUPERFAMILY Multidrug resistance efflux transporter EmrE 161 254 - -
Trre15g01526 305 PANTHER WAT1-RELATED PROTEIN 11 267 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01526 Trre-Chr15 12113945 12122991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01526 4 284 Nodulin-like Gene Family AT3G28050 44.984 6.19e-88 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g01526 - - gmx:100811686 377.867